Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2856 |
Symbol | |
ID | 5136949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 3010520 |
End bp | 3011389 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640534300 |
Product | hypothetical protein |
Protein accession | YP_001218706 |
Protein GI | 147675622 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00225782 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAC TTAGTTGCGG CTTTTTTGTG TCTAAATCAA CTTTCCTAAA GTTTGTTTCG GGCACACTTA CTCTCTCTTC GGCATATTTA GGTTTTAGGA AAGGAATCAT GGAATCCAAA CAGAGAGCCG TTTCTCGTTT GATTGCTCAG GCAGGGCAGA TGTTATTAGC GCATGGCGCA GAAAGTACTT TAGTCGGCGA TATAATGCGC CGTATGGGGT TGGCGAGTGG GATGAGTGAA GTCGAAGTCT CTCTCTCGGC GAGCTCGCTT GTGGTGACGA CCGTCTATAA AGAGCACTGC ATTACGACTG CGCGACGCAG CCCAGATCGC GGCATCAATA TGCGTGTGGT GACGCAGATT CAAAGGATCT GCATCATGAT GGAAAAAGGC ATTCTCGATC ACAGCTTAGC GCAGCGAAAA CTCAATCACA TCAGTCCAGA GCGTTACAAT CGTTGGCTAG TTGTGGTCAT GATTGGCCTC TCTTGCGCGG CATTCAGCCG TTTGGCTGGG GGCGATTGGA TGGTGTTCTT GATTACCTTG ATCGCCTCGT CAGTTGGGAT GATCGTTCGC CAAGAAATCG GCCATCGTCA GTTCAATCCA CTCATCAATT TTGCGGCAAC GGCTTTCGTG ACCTCAGTGA TTTCTGCCCA AGCTGTGATT TATCAACTCG GCAACAAACC GACGATCGTC ATGGCCTCTT CCGTGTTAAT GCTGGTGCCC GGCTTTCCAT TAATTAATGC GGTCGCAGAT ATGCTCAAAG GTTATATCAA TATGGGCATC GCACGCTTTG TGATGGCGAG TTTGCTGACT CTAGCCACGG CGCTCGGTAT TGTCGCGGCA ATGAGCATCA CCGGAATTTG GGGGTGGTAA
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Protein sequence | MPQLSCGFFV SKSTFLKFVS GTLTLSSAYL GFRKGIMESK QRAVSRLIAQ AGQMLLAHGA ESTLVGDIMR RMGLASGMSE VEVSLSASSL VVTTVYKEHC ITTARRSPDR GINMRVVTQI QRICIMMEKG ILDHSLAQRK LNHISPERYN RWLVVVMIGL SCAAFSRLAG GDWMVFLITL IASSVGMIVR QEIGHRQFNP LINFAATAFV TSVISAQAVI YQLGNKPTIV MASSVLMLVP GFPLINAVAD MLKGYINMGI ARFVMASLLT LATALGIVAA MSITGIWGW
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