Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2855 |
Symbol | obgE |
ID | 5135170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 3009319 |
End bp | 3010506 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640534299 |
Product | GTPase ObgE |
Protein accession | YP_001218705 |
Protein GI | 147675124 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000349951 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGGAG GAAAAATGAA ATTCGTAGAT GAAGCGGTAA TTAAAGTTCA AGCTGGTGAT GGCGGCAACG GTGTTGTGAG CTTCTGGCGT GAAAAATTCG TTACCAATGG CGGCCCTGAT GGTGGTGATG GTGGTGATGG CGGCGATGTG TATATGGTCG CTGATGAAAA CCTCAACACT TTGATTGACT ATCGTTTCCA GCGCTTTTAT GAAGCGGAGC GTGGTAAAAA CGGCGGTGGC GGTAACTGTA CAGGTAAAAG CGGTAAAGAC AAAGAGCTGC GCGTACCGGT AGGTACTCGT GCCGTCGATA TTCACACCAA TGAAATCATT GGTGAAGTGG CCGAACATGG CAAAAAAGTC ATGATCGCCA AAGGTGGTTG GCACGGTTTG GGCAACGCCC GTTTTAAATC CTCGGTGAAC CGCTCTCCAC GTCAAAAAAC CTTGGGTACC AAGGGTGAGC TGCGTGATAT TCGTTTAGAG CTGCTGCTGT TGGCTGACGT TGGTATGCTC GGCATGCCAA ATGCGGGTAA ATCGACCTTC ATTCGTGCTG TTTCTGCGGC TAAACCTAAA GTGGCGGATT ACCCGTTTAC CACGCTAGTA CCAAGCCTTG GTGTGGTGAG CGTGCTGCCG GAGAAAAGCT TTGTGGTGGC TGACATCCCA GGCTTGATTG AAGGCGCTGC GGAAGGGGCT GGTTTAGGGA TTCGTTTCCT TAAGCACCTT GAACGTTGTC GCGTGCTGCT ACACATGATT GATATCATGC CTGCTGATCA AAGCGATCCT GCACACAATG CGTTGACCAT TATTGATGAG CTTGAACAGT ACAGTGAAAA GCTGGCGAAA AAGCCACGTT GGTTAGTGTT CAACAAAGTT GATCTGATGT CAGAAGAAGA AGCGGATGAG ATCATTCAAA ACATCATCGA TGCTCTGGCA TGGGAAGGCG ATTACTTCAA AATCTCTGCG GCGAATCGTC AAGGCACCAA AGAGCTGTGC ATGAAGCTTG CCGAGTTCAT GGATACCTTA CCAAGAGAAG CGGAAGAGAA AACAGAAGCC GAAAAAGTCG ATTTCACATG GGATTATAAC CATAAAGACG GATTGGCTGG TCGTGAAGTG ATCACTGAAG ATGATGACGA TTGGGATGAT TGGGACGATG AAGAAGATGA CGGCCACGTT ATCTATGTTC GTGACTGA
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Protein sequence | MSGGKMKFVD EAVIKVQAGD GGNGVVSFWR EKFVTNGGPD GGDGGDGGDV YMVADENLNT LIDYRFQRFY EAERGKNGGG GNCTGKSGKD KELRVPVGTR AVDIHTNEII GEVAEHGKKV MIAKGGWHGL GNARFKSSVN RSPRQKTLGT KGELRDIRLE LLLLADVGML GMPNAGKSTF IRAVSAAKPK VADYPFTTLV PSLGVVSVLP EKSFVVADIP GLIEGAAEGA GLGIRFLKHL ERCRVLLHMI DIMPADQSDP AHNALTIIDE LEQYSEKLAK KPRWLVFNKV DLMSEEEADE IIQNIIDALA WEGDYFKISA ANRQGTKELC MKLAEFMDTL PREAEEKTEA EKVDFTWDYN HKDGLAGREV ITEDDDDWDD WDDEEDDGHV IYVRD
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