| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2854 |
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| Symbol | rpmA |
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| ID | 5135269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 3008872 |
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| End bp | 3009132 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640534298 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001218704 |
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| Protein GI | 147674595 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000234792 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACACA AAAAAGCTGG TGGTTCTACT CGTAACGGCC GCGATTCAGA AAGCAAACGT
CTAGGTGTTA AGCGTTTCGG TGGTGAATCT GTACTTGCAG GTAACATCAT CGTTCGTCAA
CGTGGTACTA AGTTCCACGC TGGCACTAAC GTAGGTATCG GTAAAGATCA CACTCTATTC
GCTCTATCTG ATGGTAAAGT GAAGTTCGAG GTTAAAGGTC CTAACAACCG TAAATTCGTT
AGCATCGAAA CTGCTGAATA A
|
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| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGTN VGIGKDHTLF
ALSDGKVKFE VKGPNNRKFV SIETAE
|
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