| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2849 |
|---|
| Symbol | argR |
|---|
| ID | 5135798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 3003530 |
|---|
| End bp | 3004063 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640534293 |
|---|
| Product | arginine repressor |
|---|
| Protein accession | YP_001218699 |
|---|
| Protein GI | 147673582 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1438] Arginine repressor |
|---|
| TIGRFAM ID | [TIGR01529] arginine repressor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCATGCA TAGGTATGCG AGAATATGCA CAAATCGATC ATTTAACCAA AGTAAGAAGA
ACCATGCGTA ACGTAGATAA ACAAGACAAC CTAGTCCGAG CCTTCAAAGC CTTACTAAAA
GAAGAACGCT TTGGCTCACA AGGCGATATT GTTGAAGCGC TAAAAAATGA AGGCTTTGAC
AACATCAACC AATCCAAAGT ATCGCGCATG CTGACCAAGT TTGGCGCGGT ACGTACCCGT
AACGCTAAGA TGGAGATGGT TTACTGCTTG CCTGCAGAAT TAGGCGTACC GACAGCGAGT
AGCTCACTGC GTGAATTAGT GCTGGATGTG GATTACAACA ACGCGTTGGT GGTGATCCGC
ACAGGTCCGG GAGCGGCACA ATTGATCGCT CGCTTGCTCG ACTCTCTCGG TAAATCCGAA
GGCATTCTCG GGGTAGTCGC TGGCGATGAC ACGATTTTTA TCACCCCGAC CTTGGATGTT
CCAGTGAAAG AGCTGTTTCA CTCTGTGTGC GAATTGTTTG AATACGCCGG TTAA
|
|---|
| Protein sequence | MSCIGMREYA QIDHLTKVRR TMRNVDKQDN LVRAFKALLK EERFGSQGDI VEALKNEGFD
NINQSKVSRM LTKFGAVRTR NAKMEMVYCL PAELGVPTAS SSLRELVLDV DYNNALVVIR
TGPGAAQLIA RLLDSLGKSE GILGVVAGDD TIFITPTLDV PVKELFHSVC ELFEYAG
|
|---|
| |