Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2815 |
Symbol | ssb |
ID | 5136588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2964700 |
End bp | 2965233 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640534259 |
Product | single-stranded DNA-binding protein |
Protein accession | YP_001218665 |
Protein GI | 147673244 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGCC GTGGCGTGAA CAAAGTAATT TTGATTGGTA ACTTAGGCCA AGATCCTGAA GTGCGTTATA TGCCAAGCGG CGGCGCAGTA GCGAATATCA CCATCGCGAC CTCCGAAACC TGGCGTGATA AAGCCACAGG TGAACAGAAG GAAAAAACCG AATGGCACCG AGTTACTCTG TATGGAAAAT TGGCAGAAGT GGCTGGTGAA TATTTGCGTA AAGGTTCTCA AGTTTACATT GAAGGCCAAC TGCAAACGCG TAAGTGGCAA GATCAAAGTG GTCAAGATCG CTACTCAACC GAAGTGGTTG TACAAGGCTA TAACGGTATC ATGCAGATGC TGGGTGGACG TGCACAGCAA GGTGGAATGC CAGCCCAAGG CGGCATGAAT GTTCCTGCGC AGCAAGGAAG TTGGGGACAA CCACAACAAC CGGCGAAGCA GCATCAGCCT ATGCAACAAT CTGCGCCTCA ACAGTACTCG CAACCGCAGT ATAATGAGCC GCCGATGGAT TTTGATGACG ACATCCCGTT TTAG
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Protein sequence | MASRGVNKVI LIGNLGQDPE VRYMPSGGAV ANITIATSET WRDKATGEQK EKTEWHRVTL YGKLAEVAGE YLRKGSQVYI EGQLQTRKWQ DQSGQDRYST EVVVQGYNGI MQMLGGRAQQ GGMPAQGGMN VPAQQGSWGQ PQQPAKQHQP MQQSAPQQYS QPQYNEPPMD FDDDIPF
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