Gene VC0395_A2795 details

Gene Information

• Locus tag: VC0395_A2795
• Symbol: cysJ
• ID: 5136097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2938961
• End bp: 2940805
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640534241
• Product: sulfite reductase (NADPH) flavoprotein alpha-component
• Protein accession: YP_001218653
• Protein GI: 147675416
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
• TIGRFAM ID: [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.0773977
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGGG AAGTCGTGAC GATGTCTACA GGAAACACTT TACCCCCGGC GCTAGCGGCA 
CTCGCTAGTC CGTTAAATGA TGCACAGCTC AATCAACTCC AACAAACCGT AACCCAACTG 
AATGCTCAGC AATTAGCTTG GGTCAGTGGT TATTTCTGGG GATTGAGTCA ATCCAATGCA 
TTGAGCGTTC CACACATTTC CGCTGGGCAG ACTGCGTCTG CTGCTTCGGG TAAGCTGACG 
ATCATTTTCG CTTCGCAAAC GGGAAATGCG AAAGGTGTTG CTCAAGCGTT ATTGAAAGAA 
GCGCAAGCTG CAGGCATTCA GGCCCAGTTA TTTGACGCGA GCGATTACAA AGGCAAAGAC 
TTAGCCAAAG AAACCCATGT AATTTTTGTC GCCTCAACCA ATGGTGAAGG TGAAGCGCCG 
GATAATGCAC TGGCACTGCA TGAGTTTCTC AAATCCAAAA AAGCCCCCAA GCTGCCTAAT 
CTTAAATATG GCGTCTTAGG ATTGGGGGAT TCCAGTTATC AGTTTTTCTG CCAAACCGGC 
AAAGACTTTG ATCAGTTTTT AGAAAACCTT GGGGCGCAAC GTCTGGTTGA GCGCTTAGAT 
GCGGATGTCG ATTATCAGGC TGCAGCGACT GAGTGGCGCA AGCAAGTGCT GTCTATTTTG 
AAAGATGAGC TGACAGGAGC CGCGGCAGTG ACGAGCGTGG CTACTTTCGC AGTGAGCCAG 
ACAGCTGAGA GTCACTACAG TAAAGAGCAA CCTTACACGG CGAGCTTATC GACGAGCCAA 
AAAATTACTG GCCGTGACTC AGGCAAAGAT GTTCGCCACA TCGAAATTGA TTTGGCCGAT 
TCTGGCATCA CATACCAACC GGGTGATGCA TTAGGTGTGT GGTATGAAAA CCGTCCACAG 
CTGGTTAATG CCCTACTCGA TAGCGTAGGA CTTTCTGGTC ATGAAGAAGT ACAAGTGGAT 
GGCGAAACGC TTTCTCTGCA TTCGGCACTG ACTCATCATT ATGAAATTAC TGCAGCCAAT 
CCGCAGTTGG TGGCGCAATT TGCTGAGCTT GCACAAAGCG AAAAGCTCAC CTCTTTAGCC 
CAAGATAAAG AGGCACTGCG TGAATACGCG ACGCGTACGC AAGTGATTGA TGTGTTGCGC 
GAAGAAAAAG TCACCCTTTC CGCGATTCAA CTGTTATCAC TTCTCCGTCG TTTAACGCCG 
CGTCTATATT CGATTGCCTC TAGTCAAAGT GAGGTGGGGG AAGAGGTGCA TCTGACGGTT 
GGGGTGGTCG AGTATGAGTA TAAGGGAGAG CAACGCTTGG GTGGTGCATC CAGCTTCTTA 
GCTCATCAAT TAGAAGAGGG CGCTCCGGTT AAAGTCTTTG TTGAGCACAA TAACAACTTC 
AAATTGCCGA GTGATGATAA TGCGCCGCTG ATCATGGTAG GCCCCGGAAC GGGAATTGCT 
CCTTTCCGTA GCTTCATCCA AGAGCGCGAA AACCGTGGTG CAGCAGGAAA AAACTGGCTG 
TTGTTTGGTG ACCGCACCTT TACCCAAGAT TTCCTCTACC AAGTCGAGTG GCAAAAGTAC 
CTCAAGTCTG GCGTGTTAAA TCGCTTAGAT GTGGCTTTTA GTCGCGATCA GCACGAAAAG 
GTGTATGTGC AGCATCGCCT TTTAGATCAA GCAGAGTTGG TATGGCAATG GTTACAAGAA 
GGCGCTTACT TCTACGTATG TGGTGATGCA TCACGCATGG CGAAGGATGT GCACCAAGCA 
TTAATTACTG TCGTCGAGCA ACAAGGTGGC TTGAATCGTG AGCAAGCTGA AGAGTATGTG 
AGTGAACTGC GTAAAGCAAA ACGTTATCAA AGGGATGTCT ACTAA 

 

Protein sequence

MNREVVTMST GNTLPPALAA LASPLNDAQL NQLQQTVTQL NAQQLAWVSG YFWGLSQSNA 
LSVPHISAGQ TASAASGKLT IIFASQTGNA KGVAQALLKE AQAAGIQAQL FDASDYKGKD 
LAKETHVIFV ASTNGEGEAP DNALALHEFL KSKKAPKLPN LKYGVLGLGD SSYQFFCQTG 
KDFDQFLENL GAQRLVERLD ADVDYQAAAT EWRKQVLSIL KDELTGAAAV TSVATFAVSQ 
TAESHYSKEQ PYTASLSTSQ KITGRDSGKD VRHIEIDLAD SGITYQPGDA LGVWYENRPQ 
LVNALLDSVG LSGHEEVQVD GETLSLHSAL THHYEITAAN PQLVAQFAEL AQSEKLTSLA 
QDKEALREYA TRTQVIDVLR EEKVTLSAIQ LLSLLRRLTP RLYSIASSQS EVGEEVHLTV 
GVVEYEYKGE QRLGGASSFL AHQLEEGAPV KVFVEHNNNF KLPSDDNAPL IMVGPGTGIA 
PFRSFIQERE NRGAAGKNWL LFGDRTFTQD FLYQVEWQKY LKSGVLNRLD VAFSRDQHEK 
VYVQHRLLDQ AELVWQWLQE GAYFYVCGDA SRMAKDVHQA LITVVEQQGG LNREQAEEYV 
SELRKAKRYQ RDVY