Gene VC0395_A2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2788 
Symbol 
ID5136325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2935594 
End bp2936061 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content44% 
IMG OID640534234 
Productputative zinc uptake regulation protein 
Protein accessionYP_001218646 
Protein GI147675507 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGGTGA TGGTTTTGGA CAACAAGCTA ACCAAGCAAA TTGAAGAAAT ATGTGCAGCA 
AGAGGGGTTC GCCTCACATC ACAGCGTAAA ACTGTGTTTG AGCTGATCTG TGCCAGTAAA
CGCTCATCAA GTGCGTATGA ACTGCTGGAA GATCTGAAAA AAAGTGAACC GCAAGCTAAA
CCTCCAACTG TATATCGAGC ACTGGATTTT TTGCTAGAAC AAGGCTTTAT TCACCGAGTA
GAGTCGACTA ACAGCTTTAT CTCTTGCTGT TCATGTAACG CTCATAAGCA CTTCTCACAT
CTGTTGATTT GTGACCAGTG CGGTAACGTG ATTGAATCTC GGGATGATAG TCTGGTAGCC
TTGCTAGCAA GTAACGCGGA GAAACACGGT TTTACGATAA GCAACCATGT CATCGAATCA
CATGGGGTTT GTCAGACCTG TCTCTCGAAA GAGAAGAAGC AACAATAG
 
Protein sequence
MMVMVLDNKL TKQIEEICAA RGVRLTSQRK TVFELICASK RSSSAYELLE DLKKSEPQAK 
PPTVYRALDF LLEQGFIHRV ESTNSFISCC SCNAHKHFSH LLICDQCGNV IESRDDSLVA
LLASNAEKHG FTISNHVIES HGVCQTCLSK EKKQQ