Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2779 |
Symbol | rpsR |
ID | 5136137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2926973 |
End bp | 2927200 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640534225 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_001218637 |
Protein GI | 147675772 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000612799 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGTT TCTTCCGTCG TCGTAAATTC TGCCGTTTTA CTGCAGAAGG CGTACAAGAG ATTGATTACA AAGACGTAGC AACTCTCAAG AACTACATCA CTGAAGCTGG TAAAATCGTT CCTAGCCGTA TCACTGGTAC AAGTGCTAAA TATCAGCGTC AGCTAGCTCG TGCAATCAAA CGCGCTCGCT ACCTAGCTCT ACTGCCATAC ACTGACAAAC ATCAGTAA
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Protein sequence | MARFFRRRKF CRFTAEGVQE IDYKDVATLK NYITEAGKIV PSRITGTSAK YQRQLARAIK RARYLALLPY TDKHQ
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