Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2760 |
Symbol | hflK |
ID | 5137642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2913866 |
End bp | 2915053 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640534206 |
Product | hflK protein |
Protein accession | YP_001218618 |
Protein GI | 147675327 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.467094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTGGA ATGAGCCTGG TAATAATAAC GGCAACAATG GCCGCGATAA TGACCCATGG GGGAACAACA ATCGCGGTAA CAAAGGTGGC CGAGATCAAG GACCGCCAGA TTTAGACGAA GTGTTTAATA AACTGAGTCA AAAGCTGGGG GGCAAGTTTG GTGGCAAAGG TGGTAAAGGC CCTTCGTTTT CCGGTGGCGG TGCGATTGGC TTTGGTGTCA TTGCAGCTAT CGCTGTTGCG GTTTGGTTCT TTACTGGTTT TTATACCATC GGTGAAGCTG AGCGCGGCGT TGTGCTACGC CTTGGCAAAT ACGACCGCAT TGTTGATCCG GGTCTGAACT GGCGTCCACG CTTTATTGAT GAAGTGACAC CAGTCAACGT GCAAGCGATT CGCTCTCTGC GCGCCTCTGG CTTGATGCTG ACCAAAGATG AAAACGTGGT AACGGTATCG ATGGATGTGC AATATCGTAT TGCCGATCCA TACAAATACT TGTATCGCGT GACCAACGCG GATGACAGCT TGCGTCAAGC AACGGACTCT GCGCTTCGTG CCGTAGTCGG TGACTCACTG ATGGATAGCA TCCTAACCAG TGGTCGTCAG CAAATTCGCC AAAGCACGCA GCAGACACTC AACCAAGTCA TCGATAGCTA TGATATGGGC TTGATGATTG TTGATGTGAA CTTCCAGTCG GCTCGTCCAC CTGAGCAAGT AAAAGATGCC TTTGACGATG CGATTGCAGC CCGTGAGGAT GAAGAGCGTT TCATTCGCGA AGCGGAAGCT TACAAGAACG AAATTTTGCC TAAAGCCACA GGCCGTGCTG AGCGTCTGAA GAAAGAAGCG CAAGGTTACA ACGAGCGCAC CATCAATGAA GCGCTCGGTC AGGTTGCTCA GTTTGAAAAG CTGTTGCCTG AGTATCAAGC TGCACCGAAA GTAACCCGTG ACCGTCTCTA TTTGGATGCG ATGGAGCAGG TGTATAGCAA TACTTCAAAA GTACTGATTG ATTCTGAATC GAGCGGTAAT CTGCTTTATC TGCCGATTGA TAAGTTAGCG GGTCAAGACA ATAAAACGGC GCAGCCGCGT CCAAATAAGT CTTCATCAGC CTACGATCAA ATTGAGCTTG AATCACAAAC GACAGAAACG AATACCGACA CTCAGTCGCG TAGCACCACA CGTCAAGGGA GATACTAA
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Protein sequence | MAWNEPGNNN GNNGRDNDPW GNNNRGNKGG RDQGPPDLDE VFNKLSQKLG GKFGGKGGKG PSFSGGGAIG FGVIAAIAVA VWFFTGFYTI GEAERGVVLR LGKYDRIVDP GLNWRPRFID EVTPVNVQAI RSLRASGLML TKDENVVTVS MDVQYRIADP YKYLYRVTNA DDSLRQATDS ALRAVVGDSL MDSILTSGRQ QIRQSTQQTL NQVIDSYDMG LMIVDVNFQS ARPPEQVKDA FDDAIAARED EERFIREAEA YKNEILPKAT GRAERLKKEA QGYNERTINE ALGQVAQFEK LLPEYQAAPK VTRDRLYLDA MEQVYSNTSK VLIDSESSGN LLYLPIDKLA GQDNKTAQPR PNKSSSAYDQ IELESQTTET NTDTQSRSTT RQGRY
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