| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2583 |
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| Symbol | |
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| ID | 5135662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2736854 |
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| End bp | 2738815 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640534032 |
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| Product | iron-hydroxamate transporter permease subunit |
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| Protein accession | YP_001218462 |
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| Protein GI | 147673981 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component
[COG4606] ABC-type enterochelin transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTGC TGCGTTTAAC TGGTTTGGGG GCGCTGACTC TACTGTTGGC GCTTGTTAGC
TTACAGTGGG GGCACAATTT AACCCTCAAT GAGCAGTGGC AATTGGTGCT CGGTCATCAA
GCCGCGCAAA GTTTCGCGCA GGTGAATTTT ATCTACGCGC AGCTACCCCG TGCGGTGATG
GCCATAGTGG TCGGCGCGGT GCTTGGGTTG GTGGGCAGCT TGATGCAGCA GTTGACCCAA
AACCGACTCA CCTCACCGCT GACGTTGGGA ACCTCATCCG GTGCTTGGTT GGGGCTGATT
ATCGTCAATA TCTGGTTCAG TGATTGGGTG GCTGATTACA GCGCACTGGC TGCGATGGCT
GGAGCACTGC TCGCTTTCGC ACTGATAATC TCGATAGCGG GGCTACGCAA TCTCACCGGA
TTACCGCTAG TCGTTTCCGG CATGGTGGTG AACATTTTGC TGGGTTCGAT TGCCACGGCC
TTGGTACTGC TGAACGAAGA GTTCGCTCAG AATGTGTTTA TGTGGGGCGC AGGTGATTTA
GCGCAAAACG GCTGGGAGTG GCTCACTTGG TTGCTGCCGC GTTTGGCTTT GGTGTTCCCG
TTACTGCTGT TTGCACCTCG AGTGCTGACT TTGCTTCGGT TAGGCCATGA AGGGGCGGCG
GCGCGTGGTT TAGCGGTATT GCCTGCTTTC TTGTTTCTGA TGGCAGGCGG GATTTGGTTG
GTCTCTGCTT CAATCACCGC AGTTGGGGTG ATCGGTTTTA TCGGTTTATT AACCCCGAAT
ATCGCCCGTT CACTGGGGGC GCGCACGACC AAAATGGAGT TGTACAGCAG TGCGCTGCTT
GGCGCTTTGT TGCTGCTTGC CACTGACATG CTCGCCATGG GGCTGAGCGT GTGGGCTGAG
GAAGTGGTAC CTAGCGGCAT TACTGCCGCC GTGATTGGTG CTCCGGCGCT GATCTGGTTT
AGTCGTCGCC AGCTCCAAGC GCAGGATTCG CTCTCTATCT CCTTGTCTTC ACATCGCCGT
TCGCCTTCTC GATGGGCGGT GATGCTCATT GCGGCAGCTT TGTTGTTGGC ACTGAGCCTA
CATATTGGTT GGCAGATGGA AAGTGCAAGC TGGGCGCTGC CGAGTGAGTT TCAATGGCCG
CTTCGTTGGC CGCGCATGCT CACCGCGCTG TTTGCTGGGG TGGGATTGGC GATCGCGGGA
ACGTTACTGC AACGGCTGAT TTATAACCCG TTAGCCAGCC CCGATATTTT GGGCGTCTCT
TCGGGGGCTA CGTTTGCTTT GGTGTTTGCT AGCTTGTTTT TAGGGCAAAG TTTGCAGAGC
ACCCACTGGA TGACAGCACT GCTTGGCAGC GCTGCGGTAT TGGTGGCGCT GTTGCTGCTT
GGGCGGCGCC ATCATTACGC ACCATCTAGC TTGATCTTGA CTGGGATTGC CATCACTGCA
CTGTTGGAAG CCTTGGTGCA ATTTACCTTG GCTAAAGGAA CGGGCGACAG CTATCAGATT
TTGCTGTGGC TATCGGGCTC AACTTATCGT GCCACGGGCG AGCAAGCTTT GCTGCTCAGC
GTGGGTGTGG TGGGGTTAAC ACTGTTGGCG CTTGGCTTGT CTCGTTGGCT TACCTTGATC
TCAATTGGGC GCGGCTTTGC TTCTGCTCGC GGCTTGAGTG CGAGTCGCGC CAGCTTAGTG
TTGCTGATCT TGGTCGCGCT GTTGTGCGCT TTGGTGACCG CGACCATGGG CCCCGTCAGC
TTTGTCGGTT TGATTGCGCC ACACATGGCG ATGATGCTCG GCGCGCAGCG TGCTCCATCT
CAACTTCTGC TGGCCGCCTT GGTCGGTGGT ACTTTGATGT TGTGGGCAGA CTGGTTGGGG
CAAGCCTTGT TATTCCCCGC GCAAATTGCC GCAGGCACGC TAGTGGCAAT CATTGGTGGC
AGCTATTTCC TGCTGCTGTT ACTCAGTCAG CGTGCACGCT AA
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| Protein sequence | MSVLRLTGLG ALTLLLALVS LQWGHNLTLN EQWQLVLGHQ AAQSFAQVNF IYAQLPRAVM
AIVVGAVLGL VGSLMQQLTQ NRLTSPLTLG TSSGAWLGLI IVNIWFSDWV ADYSALAAMA
GALLAFALII SIAGLRNLTG LPLVVSGMVV NILLGSIATA LVLLNEEFAQ NVFMWGAGDL
AQNGWEWLTW LLPRLALVFP LLLFAPRVLT LLRLGHEGAA ARGLAVLPAF LFLMAGGIWL
VSASITAVGV IGFIGLLTPN IARSLGARTT KMELYSSALL GALLLLATDM LAMGLSVWAE
EVVPSGITAA VIGAPALIWF SRRQLQAQDS LSISLSSHRR SPSRWAVMLI AAALLLALSL
HIGWQMESAS WALPSEFQWP LRWPRMLTAL FAGVGLAIAG TLLQRLIYNP LASPDILGVS
SGATFALVFA SLFLGQSLQS THWMTALLGS AAVLVALLLL GRRHHYAPSS LILTGIAITA
LLEALVQFTL AKGTGDSYQI LLWLSGSTYR ATGEQALLLS VGVVGLTLLA LGLSRWLTLI
SIGRGFASAR GLSASRASLV LLILVALLCA LVTATMGPVS FVGLIAPHMA MMLGAQRAPS
QLLLAALVGG TLMLWADWLG QALLFPAQIA AGTLVAIIGG SYFLLLLLSQ RAR
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