| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2573 |
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| Symbol | |
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| ID | 5135912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2724275 |
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| End bp | 2725087 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534022 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | YP_001218452 |
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| Protein GI | 147673771 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCTCTA TGGATACAGT GAATTATCGC CCCAGCGCTT ACCCCGCGAT CAGTCTGATT
GAAGCCGACT ATCGCCAGTT TGCGTTTGAG CGTCACTACC ATCTGGATAT CCATATCGGT
CTCATCACCC AAGGTGTACA ACGTTTTTAT CACCAAGGGG CTTGGCATCA AGTGGGACAA
GGTGGTGTGG TACTGATGTC ACCCGATGAA TTGCATGATG GCCACGCGCA CAGTAATACG
GGCTATCAAG TACAAGTGTT CTCCATTGAA CCTGAATGGT TACAGCAGAC GCTCGAAGCC
AACCAGATTG AGCAAGTGAT CGGCTTTGAG CAGTTGATTG TACAAGACCC GACCCTATTT
CACTCCTTGC AGCAACTTCA CCATTTGCTG CGACAGGACA ACCTCAGCCA GCTCGCCAAA
GATTGCTTAC CTTATCAAGG CTTTGCTCCG CTGCTTGAGC GTTATAGCTA CCTAAAACAA
CCCACCGTAA AACCGCTTGG CCAACACAAT CTCGCCCTAC TCAAAGAGTG GGTACTCAGC
CAGCTTGACC AACCGATCCG GCTCGAACAG TTAGCGCAAT TGTGCCAACT CTCCCCAACT
CAATTTCAGC GCCATTTTAA AGCGCAAACG GGGCTCACGC CTTACGCTTG GTTACGACGG
CTACGCCTAG AGCAAGCAAT GAAACTGCTG CAAAGTGGCA AACCAGGCAC AGATGTCGCG
TATCAGGTCG GCTTTTACGA TCAGGCCCAT TTCAGTAAAG CCTTCAAAGC CACTTATGGC
CTTTCGCCTT CTTTGATCAC TCGCTTTTCT TAA
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| Protein sequence | MVSMDTVNYR PSAYPAISLI EADYRQFAFE RHYHLDIHIG LITQGVQRFY HQGAWHQVGQ
GGVVLMSPDE LHDGHAHSNT GYQVQVFSIE PEWLQQTLEA NQIEQVIGFE QLIVQDPTLF
HSLQQLHHLL RQDNLSQLAK DCLPYQGFAP LLERYSYLKQ PTVKPLGQHN LALLKEWVLS
QLDQPIRLEQ LAQLCQLSPT QFQRHFKAQT GLTPYAWLRR LRLEQAMKLL QSGKPGTDVA
YQVGFYDQAH FSKAFKATYG LSPSLITRFS
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