| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2565 |
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| Symbol | |
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| ID | 5137514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2712670 |
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| End bp | 2713698 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640534014 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | YP_001218444 |
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| Protein GI | 147674097 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.304242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGCTTC ATCGCGCCCA CAGATTCACA TGGAAAGTTA AGGGGCAAGG AATGTTTTCG
TTTCTGGTCA AGCGCCTGTA TCAGGCACTG ATAGTGATGT TTGTGATCAG TTTGGTAGCG
TTTGCCATTC AGGACAACCT GGGTGATCCG CTGCGCGAGC TTGTGGGTCA GTCCGTTTCT
GAAGCAGAGC GTCAAGCACT GCGTGACGAA TTAGGCCTCA ATGATCCCTT CATTATTAAA
TATTCTCGTT TTGTGACTGC GGCGGTGCAG GGGGATTTAG GGACCTCCTA TTTCTTTAAG
CGTCCGGCGC TGGAAGTGAT CTTCGATAAG CTGGTGGCGA CACTGGAGCT GGTGTTTGGT
GCCACGTTGA TCATCATAGT GTTTTCAATC CCGCTTGGGG TCTATTCGGC GATTCATCCG
AAAAGCTTGT TTACCAAGAT AGTGATGGCG GGCAGCAGCA TCGGCATTTC GATCCCGGTC
TTTTTAACCG CGATCATGCT GATGTATGTC TTCTCGATTG AGTTAGGTTG GTTGCCGTCC
TATGGTCGTG GCGAAACCGT TAACCTACTG GGCTGGGAGT CCGGCTTCTT TACCCTCGAT
GGCTTGCGCC ATCTGGTATT GCCTTCTATC GCACTGGCTT CCATTATGTT GCCGCTGTTC
ATCCGCCTCG TGCGCTCGGA AATGCTCGAA GTACTGAGCT CGGAATACAT CAAGTTTGCG
CAAGCCAAAG GTTTGCCACT CAACAAAATC TATTACCAAC ATGCGCTGAA AAACACCATG
TTGCCGGTAT TGACCGTGGG TGGGGTGCAG ATTGGTACTA TGGTGGCCTA CACCATTTTG
ACCGAAACCG TATTCCAGTG GCCGGGAACG GGCTTCTTGT TTTTAGAGGC GATTAACCGT
GTGGATACGC CACTTATCAC CGCCTACGTC ATCTTTGTTG GGTTGATCTT TGTCGTGACC
AACACGATTG TCGACCTCTT GTATGGCCTG ATTAACCCGA CCGTCAACCT CACTGGCAAA
GGAGCTTAA
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| Protein sequence | MGLHRAHRFT WKVKGQGMFS FLVKRLYQAL IVMFVISLVA FAIQDNLGDP LRELVGQSVS
EAERQALRDE LGLNDPFIIK YSRFVTAAVQ GDLGTSYFFK RPALEVIFDK LVATLELVFG
ATLIIIVFSI PLGVYSAIHP KSLFTKIVMA GSSIGISIPV FLTAIMLMYV FSIELGWLPS
YGRGETVNLL GWESGFFTLD GLRHLVLPSI ALASIMLPLF IRLVRSEMLE VLSSEYIKFA
QAKGLPLNKI YYQHALKNTM LPVLTVGGVQ IGTMVAYTIL TETVFQWPGT GFLFLEAINR
VDTPLITAYV IFVGLIFVVT NTIVDLLYGL INPTVNLTGK GA
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