| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2536 |
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| Symbol | trkH-2 |
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| ID | 5136193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2689015 |
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| End bp | 2690472 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533987 |
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| Product | potassium uptake protein TrkH |
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| Protein accession | YP_001218429 |
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| Protein GI | 147673487 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000177354 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTTC GTTCAATTAT CCGTATTGTC GGGCTTTTGC TCGCTCTATT TAGCGTTTCT
ATGCTTGCGC CTGCGTTGGT GGCTTTGATC TACCGCGATG GGGCAGGTGT GCCGTTTGTC
TCAACCTTTT TTGTATTACT GCTGTGTGGC GGCTTATTCT GGTTTCCGAA CCGCCATCAT
AAACATGAAC TCAAGGCACG GGATGGTTTT TTAATCGTCG TATTGTTCTG GACAGTAATC
GGCAGCGCTG GCGCATTACC TTTTTTGCTC GCAGCCGATC CCAACATTTC AGTCACCGAT
GCGTTTTTCG AATCCTTTTC GGCGTTAACG ACCACGGGGG CGACCGTGAT TGTTGGCTTA
GACGAACTCC CCAAAGCCAT CCTTTTCTAT CGCCAATTTT TGCAATGGTT TGGTGGAATG
GGGATCATCG TACTCGCCGT CGCGATTTTA CCTGTACTTG GCATCGGTGG GATGCAGCTT
TATCGAGCGG AAATTCCCGG ACCAGTCAAA GATACCAAAG TGACTCCAAG GATTGCAGAA
ACCGCCAAAG CGCTTTGGTA TATCTATTTA AGCTTAACCA TCGCTTGCGC CAGCGCTTTC
TGGTTAGCGG GAATGAGTTT ATTTGATGCG ATTTGCCATA GCTTCTCGAC CATCGCCATC
GGCGGTTTCT CAACTCACGA TGCCAGTATG GGGTATTTCG ACAGTTATGC GATAAACCTC
ATCACCGTCG TTTTCTTACT GATCTCATCA TGTAACTTCA CTTTGCATTA TGCTGCTTTC
GCAACGGGCG GTGTACACCC TAAGTACTAT TGGCGCGATC CTGAGTTTCG TGCATTTTTC
GTCATCCAAG TTCTGCTGTT TGTGATCTGC TTTTCTGTGT TACTGAAACA CCACTCTTAC
GACAGCTTTT ATCAAGCCTT TGACCAAGCG CTGTTCCAAA CCGTATCCAT CTCAACCACA
GCGGGTTTTA CCACCACAGG TTTTTCGGAC TGGCCACTCT TTTTACCTGT GTTATTGCTC
TTCTCCTCTT TTATAGGAGG ATGCGCAGGC TCAACGGGTG GCGGCATGAA AGTGATCCGT
GTGTTGCTAC TGACCCTACA AGGGGCTCGG GAAATGAAGC GCTTAGTTCA CCCTCGCGCC
ATCTACCCGA TCAAACTTGG CGGCAGAGCA CTCTCACAGC GCGTCGTGGA TGCGGTATGG
GGCTTCTTCT CTGCTTATGC ATTGGTGTTT GTCGTGTGTA TGCTTGCACT CATCGCCACG
GGAATGGATG AGCTGAGCGC ATTTTCTGCT GTCGCCGCCA CACTGAATAA CTTGGGGCCT
GGCCTTGGGG AAGTTGCCGT ACACTTTGCG GATGTGAATG ACAAAGCTAA GTGGATTTTG
ATTGCGTCCA TGCTGTTTGG ACGCTTAGAA ATATTTACTC TATTGATTCT GCTTACGCCG
ACATTCTGGC GTAGTTAG
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| Protein sequence | MQFRSIIRIV GLLLALFSVS MLAPALVALI YRDGAGVPFV STFFVLLLCG GLFWFPNRHH
KHELKARDGF LIVVLFWTVI GSAGALPFLL AADPNISVTD AFFESFSALT TTGATVIVGL
DELPKAILFY RQFLQWFGGM GIIVLAVAIL PVLGIGGMQL YRAEIPGPVK DTKVTPRIAE
TAKALWYIYL SLTIACASAF WLAGMSLFDA ICHSFSTIAI GGFSTHDASM GYFDSYAINL
ITVVFLLISS CNFTLHYAAF ATGGVHPKYY WRDPEFRAFF VIQVLLFVIC FSVLLKHHSY
DSFYQAFDQA LFQTVSISTT AGFTTTGFSD WPLFLPVLLL FSSFIGGCAG STGGGMKVIR
VLLLTLQGAR EMKRLVHPRA IYPIKLGGRA LSQRVVDAVW GFFSAYALVF VVCMLALIAT
GMDELSAFSA VAATLNNLGP GLGEVAVHFA DVNDKAKWIL IASMLFGRLE IFTLLILLTP
TFWRS
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