| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2526 |
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| Symbol | atpA |
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| ID | 5135244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2676460 |
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| End bp | 2678001 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533977 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001218419 |
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| Protein GI | 147674668 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.52582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTA ATTCCACGGA AATTAGCGAT CTGATCAAAC AACGTATTGA ATCTTTCAAC
GTTGTTAGTG AAGCTCGCAA CGAAGGTACT ATCGTATCGG TAAGCGACGG TATCATTCGT
ATTCACGGCC TTGCAGATGT TATGCAAGGT GAAATGATTG AATTACCGGG CAACCGTTAT
GCACTGGCAC TGAACCTTGA GCGTGACTCG GTCGGTGCGG TAGTAATGGG TCCATACGCG
GATCTGCGTG AAGGCATGAA AGTAACAGGT ACTGGCCGTA TTTTGGAAGT TCCTGTTGGT
CCTGAGCTGC TAGGTCGTGT AGTTAACACT CTGGGTGAGC CGATTGATGG TAAAGGCCCA
ATCGGTGCAA AACAGACTTC ACCAGTTGAA GTGATCGCAC CGGGTGTTAT CGATCGTAAG
TCGGTTGATC AACCTGTTCA AACTGGTTAC AAATCAGTGG ACTCGATGAT TCCAATCGGC
CGTGGCCAGC GTGAGCTGAT CATCGGTGAC CGTCAAACAG GTAAAACTGC GTTGGCGATT
GATGCGATCA TCAACCAGAA AAACTCTGGT ATTTACTCTA TCTATGTTGC TATCGGCCAG
AAAGCGTCAA CCATTGCGAA CGTAGTTCGT AAATTGGAAG AGCACGGCGC ACTGAAAAAC
ACCATTGTTG TGGTGGCTTC AGCGTCTGAA TCTGCTGCAC TGCAATACCT CGCGCCTTAC
TCAGGCTGTG CGATGGGTGA ATACTTCCGC GATCGCGGTG AAGATGCGCT GATTGTATAC
GATGACCTGT CTAAACAGGC TGTTGCTTAC CGTCAAATCT CACTGCTTCT GCGTCGTCCA
CCAGGCCGTG AAGCTTTCCC TGGCGACGTT TTCTACCTCC ACTCTCGTCT ACTAGAGCGT
GCCGCTCGTG TAAACGAAGA GTACGTAGAG CGTTTCACCA AGGGTGAAGT GAAAGGTAAG
ACCGGTTCTC TAACCGCTCT GCCAATCATC GAAACTCAAG CTGGTGACGT ATCGGCATTC
GTACCGACCA ACGTAATCTC GATCACTGAT GGTCAGATCT TCCTACAAAC TGAACTGTTC
AACGCGGGCG TACGTCCAGC GGTTGACCCA GGTATCTCAG TTTCTCGTGT AGGTGGTGCA
GCGCAAACCA AGATCGTTAA GAAGCTCTCT GGTGGTATCC GTACTGCTCT GGCTGCTTAC
CGTGAATTGG CGGCGTTTGC TCAGTTCTCT TCGGATCTGG ATGAAGCGAC CAAGCGTCAG
CTGACTCACG GTCAGAAAGT GACTGAACTG ATGAAGCAGA AACAGTATGC ACCAATGTCT
GTCTTTGATC AGGCTCTGGT GATCTTTGCT GCGGAACGTG GCTATCTGAC AGACGTAGAA
CTGAACAAGG TTCTCGACTT CGAAGCTGCT CTACTATCGT ATGCTCGTGC TCATTACGCT
GAATTGGCAG CGCAAATCGA CAAGACGGGT GCTTACAACG ATGAGATCGA AGCTCAGCTG
AAGAAGCTGG TTGACGATTT CAAAGCAACC CAAACTTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIESFN VVSEARNEGT IVSVSDGIIR IHGLADVMQG EMIELPGNRY
ALALNLERDS VGAVVMGPYA DLREGMKVTG TGRILEVPVG PELLGRVVNT LGEPIDGKGP
IGAKQTSPVE VIAPGVIDRK SVDQPVQTGY KSVDSMIPIG RGQRELIIGD RQTGKTALAI
DAIINQKNSG IYSIYVAIGQ KASTIANVVR KLEEHGALKN TIVVVASASE SAALQYLAPY
SGCAMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLRRP PGREAFPGDV FYLHSRLLER
AARVNEEYVE RFTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLQTELF
NAGVRPAVDP GISVSRVGGA AQTKIVKKLS GGIRTALAAY RELAAFAQFS SDLDEATKRQ
LTHGQKVTEL MKQKQYAPMS VFDQALVIFA AERGYLTDVE LNKVLDFEAA LLSYARAHYA
ELAAQIDKTG AYNDEIEAQL KKLVDDFKAT QTW
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