Gene VC0395_A2525 details

Gene Information

• Locus tag: VC0395_A2525
• Symbol: atpH
• ID: 5136086
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2675913
• End bp: 2676446
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640533976
• Product: F0F1 ATP synthase subunit delta
• Protein accession: YP_001218418
• Protein GI: 147675001
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.046669
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGGATT TGACTACAAT CGCACGCCCC TACGCTAAAG CAGCCTTTGA TTTTGCGGTA 
GAAAAACAGC AACTTGGCCA TTGGAGCCAG ATGCTTGCTT TCACCGCTGA AGTCGCAAAA 
AACGAACAAA TGCACGAGCT GTTAACCAGC TCGGGCTCAG CTAATAAATT GGCTGAGATT 
TTTATTGCAG TTTGTGGCGA ACAGCTTGAT GGTCATGGCC AAAACCTGAT TAAGGTAATG 
GCAGAAAATG GTCGTCTGTT GGCGATTCCT GCGCTTTATG AGCACTTTGC TGTGCTAAAG 
CAGGAACATG AGAAGAAAGT AGATGTGGAA GTGATTTCCG CTACTGAACT CAGTGAACAA 
CAGCGTTCAG AAATTGGCAG CAAGCTTGAG CAGCGTTTAG AGCGCAAAGT TCAGCTGAAT 
TGCAGTGTAG ATGAGACTCT GCTTGGCGGA GTTATTATTC GAGCCGGAGA CTTAGTCATC 
GATAACTCAG CACGCGGACG TTTGAAGCGT CTGAGCGATG CATTGCAGTC TTGA 

 

Protein sequence

MSDLTTIARP YAKAAFDFAV EKQQLGHWSQ MLAFTAEVAK NEQMHELLTS SGSANKLAEI 
FIAVCGEQLD GHGQNLIKVM AENGRLLAIP ALYEHFAVLK QEHEKKVDVE VISATELSEQ 
QRSEIGSKLE QRLERKVQLN CSVDETLLGG VIIRAGDLVI DNSARGRLKR LSDALQS