Gene VC0395_A2524 details

Gene Information

• Locus tag: VC0395_A2524
• Symbol: atpF
• ID: 5135245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2675428
• End bp: 2675898
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640533975
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_001218417
• Protein GI: 147674150
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.00056725
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATATGA ACGCAACTCT GCTAGGTCAA GCAATTTCCT TTGGTATGTT TGTGTGGTTC 
TGCATGAAAT ATGTGTGGCC GCCGATTATC AAAGCGATTG AAGATCGTCA GAAGAAAATT 
GCTGATGGTT TGCAAGCCGC TGAGCGTGCA AAGAAAGATC TAGACCTGGC ACAAGCTAAT 
GCTTCAGATC AATTGAAAGA AGCAAAACGC ACAGCAACTG AGCTCATTGA GCAAGCGAAT 
AAACGTAAAG CACAAATCAT CGACGAAGCA CGTGAGGAAG CTCAGGCAGA ACGCCAGAAA 
ATCCTGACTC AAGCCGAAGC GGAGATTGAA GCAGAACGTA ACCGTGCTCG CGATGAGCTG 
CGTAAACAGG TTGCAACTCT GGCAATTGCT GGTGCTGAGA AAATTCTTGA GCGTTCAATC 
GATAAAGATA CGCACAAAGA TATTCTCGAC AACATTACTG CAAAACTTTA A 

 

Protein sequence

MNMNATLLGQ AISFGMFVWF CMKYVWPPII KAIEDRQKKI ADGLQAAERA KKDLDLAQAN 
ASDQLKEAKR TATELIEQAN KRKAQIIDEA REEAQAERQK ILTQAEAEIE AERNRARDEL 
RKQVATLAIA GAEKILERSI DKDTHKDILD NITAKL