Gene VC0395_A2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2507 
SymboldnaA 
ID5135633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2660512 
End bp2661930 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content51% 
IMG OID640533958 
Productchromosomal replication initiation protein 
Protein accessionYP_001218400 
Protein GI147674057 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000251721 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGAGG GAATCGTGTC ATCTTCGCTA TGGTTGCAAT GTTTGCAACG GCTTCAGGAA 
GAGCTACCTG CCGCAGAATT CAGTATGTGG GTGCGTCCGC TTCAAGCGGA GCTCAATGAC
AATACTCTCA CTTTATTCGC CCCGAACCGC TTTGTGTTGG ATTGGGTACG CGATAAGTAC
CTCAATAACA TCAATCGTCT GCTGATGGAA TTCAGTGGCA ATGATGTGCC TAATTTGCGC
TTTGAAGTGG GGAGCCGCCC TGTGGTGGCG CCAAAACCCG CGCCTGTACG TACGGCTGCG
GATGTCGCGG CGGAATCGTC GGCGCCTGCG CAATTGGCGC AGCGTAAACC TATCCATAAA
ACCTGGGATG ATGACAGTGC TGCGGCTGAT ATTACTCACC GCTCAAATGT GAACCCGAAA
CACAAGTTCA ACAACTTCGT GGAAGGTAAA TCTAACCAGT TAGGTCTGGC CGCGGCTCGC
CAAGTCTCTG ATAACCCAGG TGCGGCGTAT AACCCCCTCT TTTTGTATGG CGGCACCGGT
TTGGGTAAAA CGCACTTGCT GCATGCGGTG GGTAACGCGA TTGTTGATAA CAACCCGAAC
GCTAAAGTGG TGTACATGCA CTCTGAGCGT TTCGTGCAAG ACATGGTAAA AGCCCTGCAG
AACAACGCGA TTGAAGAATT CAAACGCTAC TATCGCAGTG TAGATGCCTT GTTGATCGAC
GATATTCAAT TCTTTGCCAA CAAAGAGCGT TCGCAGGAAG AGTTCTTCCA CACCTTTAAC
GCACTGCTGG AAGGCAACCA ACAAATTATT TTGACTTCTG ACCGCTATCC AAAAGAGATC
AGTGGTGTAG AAGATCGTCT CAAATCGCGT TTTGGCTGGG GCTTAACGGT GGCGATCGAG
CCGCCGGAGT TGGAAACCCG CGTCGCGATC TTGATGAAAA AAGCGGAAGA TCACCAGATT
CATCTGCCGG ATGAAGTGGC TTTCTTTATT GCGAAACGCC TGCGCTCTAA CGTGCGTGAG
TTGGAAGGCG CACTGAACCG CGTGATTGCC AACGCCAACT TTACCGGTCG CCCAATCACG
ATTGATTTCG TGCGTGAAGC ACTGCGTGAC TTATTAGCGC TGCAAGAAAA GCTGGTCACG
ATTGATAATA TTCAGAAGAC CGTTGCCGAA TACTACAAAA TTAAAGTGGC GGATCTGCTC
TCAAAACGCC GTTCGCGCTC AGTCGCTCGT CCTCGTCAAT TGGCGATGGC ACTGGCTAAA
GAGCTGACCA ACCACAGCTT GCCAGAGATT GGCGATGCGT TTGGCGGCCG TGACCACACG
ACTGTGTTAC ACGCTTGCCG TAAAATCGAG CAGTTGCGCG AAGAGAGTCA CGATATCAAA
GAAGATTATT CGAACCTGAT TCGTACGCTT TCCTCTTAA
 
Protein sequence
MSEGIVSSSL WLQCLQRLQE ELPAAEFSMW VRPLQAELND NTLTLFAPNR FVLDWVRDKY 
LNNINRLLME FSGNDVPNLR FEVGSRPVVA PKPAPVRTAA DVAAESSAPA QLAQRKPIHK
TWDDDSAAAD ITHRSNVNPK HKFNNFVEGK SNQLGLAAAR QVSDNPGAAY NPLFLYGGTG
LGKTHLLHAV GNAIVDNNPN AKVVYMHSER FVQDMVKALQ NNAIEEFKRY YRSVDALLID
DIQFFANKER SQEEFFHTFN ALLEGNQQII LTSDRYPKEI SGVEDRLKSR FGWGLTVAIE
PPELETRVAI LMKKAEDHQI HLPDEVAFFI AKRLRSNVRE LEGALNRVIA NANFTGRPIT
IDFVREALRD LLALQEKLVT IDNIQKTVAE YYKIKVADLL SKRRSRSVAR PRQLAMALAK
ELTNHSLPEI GDAFGGRDHT TVLHACRKIE QLREESHDIK EDYSNLIRTL SS