| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2499 |
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| Symbol | glyS |
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| ID | 5136303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2650392 |
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| End bp | 2652458 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533950 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001218392 |
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| Protein GI | 147674732 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG AATTTTTAAT TGAGCTAGGC ACAGAAGAGC TGCCACCAAA GCAACTGCGC
ACACTGGCTG AAGCCTTTGC GGCGAATTTT GCGGCAGAAC TGGCAACAGC TGACATCGCC
CATGAAGGCG TAACTTGGTT TGCCACGCCA CGCCGTTTGG CACTGAAAGT GGCCAATTTG
GCAGAAAGCC AACCGGATCG CGTCGTTGAA AAACGTGGTC CTGCCGTCAA CGTTGCGTTT
GATGCCGATG GCAAGCCAAC CAAAGCCGCT GAAGGCTGGG CGCGTGGCAA TGGCATCACG
GTAGAGCAAG CAGAACGTCT CGTCACAGAC AAAGGCGAAT GGCTGCTCTT CAAAGAACAA
GTGCAAGGCC AACAAACCGC TTCTGTGGTT GTGGAGATGG CGGCCAAAGC GCTGGCTAAC
CTGCCGATTG CGAAACCGAT GCGTTGGGGC GACAAAGAAA CCCAATTTAT CCGTCCAGTA
AAAACTCTGA CCATTCTGTT TGGTAGCGAA CTGATCCAAG GCGAAATCTT GGGTGTTGCT
TCTGCACGCA CCCTCCGTGG TCACCGCTTT ATGGGTGAAG CGGAATTCAC CATCGAATCG
GCTGAGCAGT ACCCTGCGAT CCTTGAAGAG CGCGGCAAAG TCATCGCTGA CTACGCGACT
CGTAAAGCGA TGATCATCGA AGGCTCACAA CAAGCGGCTC AGCAGCTCGG CGGTATCGCG
GATCTGGAAG ATGCGCTGGT AGAAGAAGTG ACCTCGCTGG TGGAATGGCC AGTGGTGATG
ACGGCGAAAT TTGAAGAAAA ATTCCTCAAA GTTCCAGCAG AAGCTTTGGT GTACACCATG
AAAGGTGACC AAAAATATTT CCCAGTCTAT GACGCAAGCA AAAAACTGCT GCCTAACTTC
ATCTTCGTTT CGAACATCGA ATCGAAAGAG CCTCGCCACA TTGTGGAAGG TAACGAGAAG
GTAGTTCGTC CACGTCTGGC AGATGCAGAG TTCTTCTTTA ATACTGACCG CAAGCGCCCA
TTGGTGGATC GCTTACCTCT GCTCGAAAAC GCGATTTTCC AACAGCAACT CGGCACGATT
AAAGACAAAA CCGACCGCAT TACTGAACTG GCTGGCTACA TCGCAGAGCA GATCGGTGCT
GACGTGGAGA AATCTAAGCG TGCAGGCCTA CTGGCAAAAT GTGACCTAAT GACCTCGATG
GTGTTTGAAT TTACCGACAC CCAAGGCGTG ATGGGTATGC ATTATGCGCG TCACGATGGC
GAAGCAGAAG AAGTTGCAGT TGCGCTGAAT GAGCAGTACA TGCCACGTTT CGCGGGTGAT
GAACTGCCAA GCCGTGGTGT TTCAGCTGCG GTCGCGATGG CTGACAAACT CGATACTATC
GTCGGTATAT TTGGTATTGG TCAGGCGCCG AAAGGCAGTG ACCCATTTGC GCTGCGTCGT
GCTTCACTGG GTGTACTGCG TATTCTGGTT GAGTACGGCT ACCAGTTGGA TCTGGTGGAT
TTGATCGCCA AAGCCAAATC ACTGTTTGGT GACCGCCTGA CTAACGCCAA CGTTGAGCAG
GAAGTGATCG AGTTTATGCT TGGCCGTTTC CCAACCTGGT ACCAAGATGC CGGTTTTAGC
ATCGACATCA TCCAAGCGGT ACTGGCGCGT AACCCAACCA AACCAGCCGA CTTTGATCAG
CGTGTGAAAG CCGTATCGCA CTTCCGCGCT CTTGAAGAAG CCGAAGCACT GGCTGCTGCC
AACAAGCGTG TAGGCAACAT TCTGGCTAAG TACGATGGTG AATTGGGTGA AGAAATCGAT
CTCGCTCTGC TGCAAGAAGA TGCGGAAAAA GCCTTAGCCG AAGCCGTCGA AATCATGGCA
GAAGCGTTAG AACCTGCGTT TGCAACCGGC AACTACCAAG AAGCTCTGAG CAAACTGGCT
GGCCTGCGCG CGCCTGTCGA TGCCTTCTTC GACAACGTGA TGGTGATGGC TGACGATGAA
GCACTGAAGA AGAACCGTCT CACGCTACTC AACAAGCTGC GTAACCTGTT CCTGCAAATT
GCCGACATTT CGCTGCTGCA AAAATAA
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| Protein sequence | MAKEFLIELG TEELPPKQLR TLAEAFAANF AAELATADIA HEGVTWFATP RRLALKVANL
AESQPDRVVE KRGPAVNVAF DADGKPTKAA EGWARGNGIT VEQAERLVTD KGEWLLFKEQ
VQGQQTASVV VEMAAKALAN LPIAKPMRWG DKETQFIRPV KTLTILFGSE LIQGEILGVA
SARTLRGHRF MGEAEFTIES AEQYPAILEE RGKVIADYAT RKAMIIEGSQ QAAQQLGGIA
DLEDALVEEV TSLVEWPVVM TAKFEEKFLK VPAEALVYTM KGDQKYFPVY DASKKLLPNF
IFVSNIESKE PRHIVEGNEK VVRPRLADAE FFFNTDRKRP LVDRLPLLEN AIFQQQLGTI
KDKTDRITEL AGYIAEQIGA DVEKSKRAGL LAKCDLMTSM VFEFTDTQGV MGMHYARHDG
EAEEVAVALN EQYMPRFAGD ELPSRGVSAA VAMADKLDTI VGIFGIGQAP KGSDPFALRR
ASLGVLRILV EYGYQLDLVD LIAKAKSLFG DRLTNANVEQ EVIEFMLGRF PTWYQDAGFS
IDIIQAVLAR NPTKPADFDQ RVKAVSHFRA LEEAEALAAA NKRVGNILAK YDGELGEEID
LALLQEDAEK ALAEAVEIMA EALEPAFATG NYQEALSKLA GLRAPVDAFF DNVMVMADDE
ALKKNRLTLL NKLRNLFLQI ADISLLQK
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