| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2487 |
|---|
| Symbol | |
|---|
| ID | 5136635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2637735 |
|---|
| End bp | 2639258 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640533938 |
|---|
| Product | ComM-related protein |
|---|
| Protein accession | YP_001218380 |
|---|
| Protein GI | 147673660 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0606] Predicted ATPase with chaperone activity |
|---|
| TIGRFAM ID | [TIGR00368] Mg chelatase-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTTG CGATCATTCA TAGCCGCGCC AGTATTGGCG TGCAGGCACC TCCGGTCACG
GTTGAGGTTC ACATCAGTAA CGGGATGCCG GGGTTTACCT TGGTAGGATT GCCAGAAACC
ACAGTAAAAG AGTCGCGCGA TCGGGTGCGC AGCGCGATCA TCAATTCTCG CTTTGAGTTT
CCAGCGAAGC GCATTACGGT CAATTTAGCG CCAGCCGATT TACCCAAAGA GGGGGGACGT
TTTGATTTGC CGATTGCACT TGGCATTTTG GCGGCCTCGG ATCAAATTGC GCGAAATAAG
CTCGAAAGTT ACGAATTTAT CGGCGAATTG GCGCTATCGG GCGAAATTCG TGGCGTGAAA
GGGGTTTTGC CTGCCGCGCT CGCGGCTAAC CAAGTGGAGC GCTGTTTGGT GGTGCCGCAC
AGTAATGGTG ATCAGGCGGC TTTGGTCGGG GTTGAGCGGC ATAAGTCGGC GCAAAGCTTA
CTCGAAGTGT GCGCAGACTT GTGTGGTCAG CAAACTCTAT CTTTGTTTCA AAGTTCGCCC
AGTGTGCAAC AAGTAAGTCA GACCCGCGAT CTGCAAGACA TCATAGGTCA GCAGCAGGGA
AAACGAGCTT TGGAAATCGC TGCGGCTGGC AATCACAACC TATTGTTTCT CGGCCCTCCG
GGGACGGGTA AAACCATGCT CGCTTCACGG CTGTGCGATT TACTGCCAGA AATGAGTGAT
GAAGAGGCAA TGGAAACAGC TTCGATTGCC TCTCTTACGC AGCAAGAGAT TAACCAACAT
AACTGGAAGT TACGCCCTTT TCGTGCACCG CACCATTCAA GCTCAATGGC GGCTTTGGTC
GGGGGCGGCA CCATTCCGCG CCCCGGTGAA ATTTCTCTCG CCCATAATGG ACTACTGTTT
TTGGACGAAA TGCCGGAGTT TGAGCGTAAA GTGCTTGATT CACTGCGTGA ACCGCTGGAA
TCGGGTGAGA TCGTGATTTC GCGCGCGCAG GGGAAAACCC GTTTTCCAGC ACGCTTTCAA
TTGGTCGGCG CGTTAAATCC AAGCCCCACG GGCTACTACG AAGGCAGTCA GGCGCGTGCC
AATCCGCAGA GTATTTTGCG CTATTTGAGT CGGCTTTCGG GCCCTTTGTT GGATCGCTTT
GATATGTCGA TTGAGATCCC AGCGTTACCC AAAGGTACGC TCGCCAATGG GGGCGATCGT
GGTGAATCGA CGGCGGCTGT GCGCCAGCGA GTGTGGGTAG CGCGTGAGCG TATGTTGGCG
CGATCGGGCA AAGTGAATGC TTTGCTGCAA AGTCGAGAAA TTGAACAGTA TTGCCCTTTG
CTTAAAGCGG ATGCGGAATT TCTAGAAAGC GCGCTGCATC GCTTGGGTTT ATCAATTCGG
GCTTACCATC GCATCATTAA AGTGGCGCGA ACCATAGCGG ATTTGCAAGG TGAAGCGCAG
ATCGCTCGTC CACATTTGGC CGAGGCGTTG GGCTATCGAG CCATGGATCG CTTACTCAAA
CAGCTCAGTG CGCAAAACGT CTAG
|
|---|
| Protein sequence | MGLAIIHSRA SIGVQAPPVT VEVHISNGMP GFTLVGLPET TVKESRDRVR SAIINSRFEF
PAKRITVNLA PADLPKEGGR FDLPIALGIL AASDQIARNK LESYEFIGEL ALSGEIRGVK
GVLPAALAAN QVERCLVVPH SNGDQAALVG VERHKSAQSL LEVCADLCGQ QTLSLFQSSP
SVQQVSQTRD LQDIIGQQQG KRALEIAAAG NHNLLFLGPP GTGKTMLASR LCDLLPEMSD
EEAMETASIA SLTQQEINQH NWKLRPFRAP HHSSSMAALV GGGTIPRPGE ISLAHNGLLF
LDEMPEFERK VLDSLREPLE SGEIVISRAQ GKTRFPARFQ LVGALNPSPT GYYEGSQARA
NPQSILRYLS RLSGPLLDRF DMSIEIPALP KGTLANGGDR GESTAAVRQR VWVARERMLA
RSGKVNALLQ SREIEQYCPL LKADAEFLES ALHRLGLSIR AYHRIIKVAR TIADLQGEAQ
IARPHLAEAL GYRAMDRLLK QLSAQNV
|
|---|
| |