| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2479 |
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| Symbol | |
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| ID | 5135874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2630833 |
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| End bp | 2631480 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533930 |
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| Product | putative hemolysin |
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| Protein accession | YP_001218372 |
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| Protein GI | 147674108 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTATGT CGAACAGTTA TGGCTTTAAA GAAGAAGTGG CCAATGCGAT AAGTCATGGC
GTTGGCCTTA TCTTAGGGAT AGTTGGTTTA GTGCTGCTGT TGGTCAAAGC GGTGGATCAG
CAAGCCGATG CATTGACTAT TACCAGCATG AGCATTTATG GCGGCAGTAT GATTGCGCTA
TTTTTGGCTT CTACGCTGTA CCACGCTATC CCTTATCAGC GTGCAAAGCG TTGGCTAAAA
ACCTTTGATC ACTGTGCTAT TTATTTACTG ATTGCGGGCA GTTATACCCC ATTTTTACTG
GTCAGTTTGC GTACACCACT GGCGGTTGGT TTGATGATAG TGATCTGGTC GCTCGCGCTT
ATTGGCATTC TGATGAAAAT TGCTTTTGTC TACCGCTTCA AAAAGCTCTC TTTGGTGACG
TATCTGACCA TGGGTTGGCT TTCGCTGATC GTGATTTACC AGCTTGCCAT TCATCTTGAG
GTGGGTGGGC TCACTCTGCT GGCGGCAGGT GGACTTATCT ATTCACTCGG GGTGATTTTC
TACGTCGCCA AACGGATCCC TTACAACCAT GCCATTTGGC ACGCTTTTGT GCTGGCGGGA
TGCGCATGCC ATTTCTTAGC CATTTATCTG TATGTCGAGC CGATTTAG
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| Protein sequence | MSMSNSYGFK EEVANAISHG VGLILGIVGL VLLLVKAVDQ QADALTITSM SIYGGSMIAL
FLASTLYHAI PYQRAKRWLK TFDHCAIYLL IAGSYTPFLL VSLRTPLAVG LMIVIWSLAL
IGILMKIAFV YRFKKLSLVT YLTMGWLSLI VIYQLAIHLE VGGLTLLAAG GLIYSLGVIF
YVAKRIPYNH AIWHAFVLAG CACHFLAIYL YVEPI
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