Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2474 |
Symbol | fmt |
ID | 5136791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2625047 |
End bp | 2625994 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533925 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_001218367 |
Protein GI | 147673280 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCCAAT CACTACGTAT TGTCTTTGCA GGTACTCCGG ATTTCGCCGC CCGTCACTTG GCGGCGTTAT TGTCTTCGGA GCATGAGATT ATTGCGGTCT ACACCCAACC GGAGCGCCCA GCGGGGCGCG GCAAAAAACT CACCGCCAGC CCAGTCAAAA CCCTTGCACT TGAGCACAAC GTTCCGGTTT ATCAGCCAGA GAACTTTAAA TCAGACGAGT CTAAACAACA GCTTGCCGCA CTCAACGCCG ATTTAATGGT GGTCGTGGCT TACGGCTTGC TACTGCCTAA AGTAGTTTTG GATACACCTA AACTTGGCTG TATTAATGTG CACGGTTCGA TTCTGCCGCG TTGGCGGGGT GCTGCGCCGA TCCAGCGTTC CATTTGGGCG GGTGATAGCG AAACTGGCGT CACCATCATG CAGATGGATG TCGGCCTTGA TACGGGCGAT ATGCTGAAAA TCGCGACGCT GCCGATTGAA GCGAGCGACA CCAGTGCCTC GATGTACGAC AAACTGGCAG AACTTGGTCC ACAAGCGCTG CTCGAGTGCT TACAAGATAT CGCTCAAGGC ACAGCGGTTG CGGTCAAACA AGATGATGGA TTGGCGAACT ACGCGCATAA ACTCAGCAAA GAAGAAGCGC GTATTAACTG GAGTGATGCA GCGACACATA TTGAGCGCTG TATTCGTGCC TTTAATCCTT GGCCGATGAG CCATTTTGAA GTAGCAGAAA ACAGCATTAA GGTTTGGCAA GCGCGTGTTG AAACACGAGC AGTAACTCAA ACTCCGGGTA CCATTATCCA AGCAGATAAG AGCGGGATTT ACGTGGCAAC CGGGCAAGAT GTACTAGTGC TCGAAAGCCT GCAAATTCCG GGCAAGAAAG CCTTGCCAGT ACAAGATATT CTCAATGCGC GTGCCGACTG GTTTAGTGTC GGTTCCCAAC TCAGTTAA
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Protein sequence | MSQSLRIVFA GTPDFAARHL AALLSSEHEI IAVYTQPERP AGRGKKLTAS PVKTLALEHN VPVYQPENFK SDESKQQLAA LNADLMVVVA YGLLLPKVVL DTPKLGCINV HGSILPRWRG AAPIQRSIWA GDSETGVTIM QMDVGLDTGD MLKIATLPIE ASDTSASMYD KLAELGPQAL LECLQDIAQG TAVAVKQDDG LANYAHKLSK EEARINWSDA ATHIERCIRA FNPWPMSHFE VAENSIKVWQ ARVETRAVTQ TPGTIIQADK SGIYVATGQD VLVLESLQIP GKKALPVQDI LNARADWFSV GSQLS
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