| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2466 |
|---|
| Symbol | |
|---|
| ID | 5137179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2618658 |
|---|
| End bp | 2619224 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640533917 |
|---|
| Product | Sua5/YciO/YrdC family protein |
|---|
| Protein accession | YP_001218359 |
|---|
| Protein GI | 147673407 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00622558 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCTGG TGGAGAATCT ACAACAGGCG GTGGATGCGC TGCGCAAAGG TTGCGTTATT
GCCTATCCAA CCGAAGGGGT GTTTGGTTTG GGGTGTGATC CGGATAACCA AACCGCTATG
CTGCGCTTAT TGGCGATCAA GCAGCGCCCC GTGGAAAAAG GGGTGATCTT AATTGCCGCT
AGCTATGCGC AGTTGCGCCC TTATGTCGAT GAAACGCAAT TAACCGCAGA GCAACTGACA
CAAGTGCTGG CTTCATGGCC CGCGCCACTG ACTTGGGTCA TGCCAGCCAG CGGTGATACG
CCAAGCTGGG TTCGTGGTCA GTTTGATACC GTTGCCGTGC GTGTTTCGGA TCATCCGGTC
GTTCAGAAGT TATGTCTCGC CTTTGGGAAG CCACTGACGT CAACCAGTGC TAATCTAAGT
GGCCAGCCCG CGTGCGTAAC TCAACAAGAA GTCATGGTTC AGCTAGGCAA TCAGATTGCT
GTGGTAGTAG AAGGGAAGAC CAGTGGCCGT CATGGACCGA GCGAAATTCG TGATGCTCGC
AGCTTACAAG TGTTAAGACA GGGATAA
|
|---|
| Protein sequence | MALVENLQQA VDALRKGCVI AYPTEGVFGL GCDPDNQTAM LRLLAIKQRP VEKGVILIAA
SYAQLRPYVD ETQLTAEQLT QVLASWPAPL TWVMPASGDT PSWVRGQFDT VAVRVSDHPV
VQKLCLAFGK PLTSTSANLS GQPACVTQQE VMVQLGNQIA VVVEGKTSGR HGPSEIRDAR
SLQVLRQG
|
|---|
| |