| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2425 |
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| Symbol | dinF |
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| ID | 5136607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2580233 |
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| End bp | 2581597 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533877 |
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| Product | DNA-damage-inducible protein F |
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| Protein accession | YP_001218325 |
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| Protein GI | 147673709 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCTGTG TGTCACTGAT TTTGCAAACG TTGAAACAAC CAAATGTGCA TCGCCAAGTG
CTGGCGATCG CGCTGCCTAT GGTGCTGTCT AACATTACCG TTCCACTGCT CGGCTTGGTC
GATGCTGCGG TGATCGGTCA TCTCGAACAC GCTTGGTATT TAGGCGGCGT GGCACTCGGC
AGCACTATGA TTAGCGTGAC ATTCTGGCTG CTCGGCTTTT TACGCATGTC GACCACAGGC
TTGACCGCCC AAGCGCACGG TGCGCAAAAT TCACAGCAGC TTGCTCGAGT TTTACTGCAA
GGCAGCGTCA TTGCACTGGG TTTAGCCGCA CTGTTTTTAC TGTTTCATAG CCCTGTCGCC
GAACTGATTT TTCACTTCAG CGATGCCAGC AGCGAAGTCA AAACCTACGC TGAAACATAT
TTCTACCTTC GTGCTTGGAG TGCTCCAGCC GCACTCCTTA ACTTTGTGCT ATTGGGCTGG
TTACTCGGTA CGCAAAATGC CCGCGCCCCG ATGTGGATGG TGATCATTAC CAACCTGACC
AATATTGTGC TCGATCTACT GTTGGTACTC GGGCTTGGGC TGAAAGTCGA AGGAGCCGCC
ATTGCGTCGG TTATCGCCGA TTATGCTGGT CTCTTGTTTG GCCTCCTGTG CGTGGCGCGT
TACTGGCGGC AGCATCAGCT CCCAGCCCCT TTCTCTTTCA TCCCCTCTCT CAGCAAAGAG
CTTTCCCGTT TAGTGGCGCT CAATCGTGAC ATCTTCCTCC GCTCACTCTG CCTGCAAGCC
GTATTTAGCT TTATGACCTT TCAAGGCACA GCGTTAGGAG ATGACATCGT CGCTGCTAAT
GCGGTGCTGA TGAGCTTTTT GATGATGATT TCCTATGGCA TGGATGGATT TGCCTACGCG
ATGGAAGCCA TGGTCGGTAA AGCAATTGGT GCCAAGGATG ATCGCCAACT GCGTACTGCC
ATGATTAGCA GTACCTTTTG GGCTACCATG ATCTGTTTGC TGTTAAGCCT GATCTTCTTA
GGTTTTGGAT CGGATCTGAT CCAGATGATC ACTAACATTC CGAGCGTTCA AGCAACGGCG
GAACATTATC TGCCTTGGCT GGTCGCCATG CCATTAATCG CCGTGTGGTG TTTTCTATTG
GATGGTGTGT TTATCGGCGC GACCAAAGGC AAAGAGATGC GAAATAGCAT GGCTGTTTCG
GCCGTAGCGT TCTTTGCCAT TTACGGGTTC ATGACACACT ACGGTAATCA CGCTCTGTGG
CTAGCCATGC TCAGCTTTAT GGCACTGCGT GGTTTTACCT TAGGGGCTAC CTTTTATACT
CAATGGCGCG CGGGGACTTT TTTACCGGCT CGCTTTTCCA TTTAA
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| Protein sequence | MFCVSLILQT LKQPNVHRQV LAIALPMVLS NITVPLLGLV DAAVIGHLEH AWYLGGVALG
STMISVTFWL LGFLRMSTTG LTAQAHGAQN SQQLARVLLQ GSVIALGLAA LFLLFHSPVA
ELIFHFSDAS SEVKTYAETY FYLRAWSAPA ALLNFVLLGW LLGTQNARAP MWMVIITNLT
NIVLDLLLVL GLGLKVEGAA IASVIADYAG LLFGLLCVAR YWRQHQLPAP FSFIPSLSKE
LSRLVALNRD IFLRSLCLQA VFSFMTFQGT ALGDDIVAAN AVLMSFLMMI SYGMDGFAYA
MEAMVGKAIG AKDDRQLRTA MISSTFWATM ICLLLSLIFL GFGSDLIQMI TNIPSVQATA
EHYLPWLVAM PLIAVWCFLL DGVFIGATKG KEMRNSMAVS AVAFFAIYGF MTHYGNHALW
LAMLSFMALR GFTLGATFYT QWRAGTFLPA RFSI
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