| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2421 |
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| Symbol | ubiA |
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| ID | 5135408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2574960 |
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| End bp | 2575814 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533873 |
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| Product | 4-hydroxybenzoate octaprenyltransferase |
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| Protein accession | YP_001218321 |
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| Protein GI | 147674415 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.755837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTG TAAAAGCGCG CGCTTACTGG CAACTGATGC GCATGGATCG CCCGATTGGC
TCCCTACTCT TACTTTGGCC TACTCTGTGG GCGCTGCTTT TAGCCGCTCA AGGCTTGCCG
GATCTTCGCG TCTTAGTCGT GTTTGTGTTA GGGGTTTTTT TAATGCGCTC GGCTGGGTGT
GTGATCAACG ATTACGCCGA CCGCCATGTC GATGGCCATG TGAAGCGCAC GAGCCAACGT
CCATTGCCCG CAGGGTTAGT TTCGGCCAAA GAAGCCTTAC TGTTATTTGT TCTTCTTGCT
GTCAGCTCGT TCTTACTCGT GTTGACTATG AATACCCTAA CTATCCAGCT CTCTTTTATC
GGTATTCTGT TAGCCTTTGT TTACCCGTTT ATGAAGCGCT TCACTCACCT GCCTCAACTG
GTGCTTGGCC TCGCGTTCAG TTGGTCGATT CCTATGGCTT GGGCTGCTCA AGCAAATACG
CTGACTCCAC AAGTCTGGGT ACTGTTTTTG ATTAATGCGT TATGGACGAT TGCTTACGAC
ACTCAATACG CCATGGTCGA CCGAGATGAT GATGTGAAAA TTGGCATCAA ATCGACCGCG
ATCTTATTCG GGCGTTGGGA TAAACGCATC ATTGGCCTAC TGCAATTGGC CACTTTGAGT
TTACTGGTCG CTCTAGGCCA AGGTTTAGCG CTTGGCACCA GTTACTACTG GGGTCTACTG
ATCGCAGCGG GGCTGTTTGC TTACCAACAA CATTTGATCC GTTATCGCGA ACGTATGCCT
TGTTTTCAGG CGTTTTTAAA TAACAACTAT GTAGGAATGG CCATCACCGC AGGCATTCTG
CTCAGCGTTT GGTAA
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| Protein sequence | MTAVKARAYW QLMRMDRPIG SLLLLWPTLW ALLLAAQGLP DLRVLVVFVL GVFLMRSAGC
VINDYADRHV DGHVKRTSQR PLPAGLVSAK EALLLFVLLA VSSFLLVLTM NTLTIQLSFI
GILLAFVYPF MKRFTHLPQL VLGLAFSWSI PMAWAAQANT LTPQVWVLFL INALWTIAYD
TQYAMVDRDD DVKIGIKSTA ILFGRWDKRI IGLLQLATLS LLVALGQGLA LGTSYYWGLL
IAAGLFAYQQ HLIRYRERMP CFQAFLNNNY VGMAITAGIL LSVW
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