| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2400 |
|---|
| Symbol | |
|---|
| ID | 5136425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2555329 |
|---|
| End bp | 2556528 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640533852 |
|---|
| Product | putative uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_001218300 |
|---|
| Protein GI | 147673752 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.92491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACA ACAATAAACC GCAACAAGAA CCTGAAATCA CAGTAAACCC AAGCTCGGCA
GCGGTGACTC CCCCGACCGC GCCCGACAAA CAAGATAGCC CAGCGCCAAA CCAACCGGCG
GCCAAGAAAA CCTTGGACAG CACACCAGCT CAAGACAAGC CGCCACAACC AAACTCGCAA
GGGAAAAAGT TGGCGAGCGT GGCGCTTTTG CTGGTATTAG CGCTCGGCGC AGGTTTTGCC
TATGTGCATC AGCAGCAAAA AAGTGAATTT AACAACCAGT TGCAAGCCGT ACGCGCAGAG
CTGAAACAGA CTCGTGATGC GCTCAATGCG CAGTTGGAAC AAACGGTATC GAAAGCCACG
TCACAAGCCA CTGAGATTAC TCATCGCGCA GAAACCGTGC TGGAACAGCA ACAAAAAAGT
ATTGAAAGCT TGCAGCTCGC CGTGGCGGAT ATTAAAGGCC GTCGCCCAAA TGATTGGCTA
CTTGCAGAAG CGGATTACTT GGTCAAGCTC GCGGGTCGCA AGCTGTTTCT TGAGCACGAT
GTGGAAACCG CAACTCAATT GATGGAAAGT GCCGATCAGC GCATCGCTGC GCTTAATGAC
CCTAGCCTCA CGGCGCTGCG TAAAGCGATG GCCAATGACA TCACTACCCT GAAAAATATC
CCGCTCATTG ACCGCGATGG CTTAGTGCTG CGCCTCATCA GCTTGCAACA GCAGATCGAT
AGCTTACCGC TGGCCAATGC CATCTTGCCT GCCGATCAGC CACAAACAAG CCAAGCGGTA
TCAGAAAACA TCGATGACTG GCAAACCAAC CTGAAAAATT CGCTCAAAGC GTTTGCCGAT
AACTTCATCA CTTTCCGCTC ACGTGATGGC AATGTGATCC CTCTTCTCTC TCCTACTCAG
CATTTTTATT TGCGAGAGAA TCTGCAGGCC AAGTTAGAAA CGGCGATCAA AGGGGTGTAC
ACGGAACAAC AAACACTCTA TCGCATCGCT CTCGACACAG CCGCCCAGTG GTCAACATCG
TTCTTCAATC CAGACGATAA AGCCGTACAA AGCTTTAACG CAGCGTTGGC CCAGCTCGCC
GAGCAGCAAG TGCAAGTGGA ATACCCCGTT AAATTACAGG CTCAGCAACA GCTCGCCGAT
GTGATCAACG AACGCTTGCG CCGCAGTGTT TCACCACTAA CCACGGGGGC TGAGCAATGA
|
|---|
| Protein sequence | MTNNNKPQQE PEITVNPSSA AVTPPTAPDK QDSPAPNQPA AKKTLDSTPA QDKPPQPNSQ
GKKLASVALL LVLALGAGFA YVHQQQKSEF NNQLQAVRAE LKQTRDALNA QLEQTVSKAT
SQATEITHRA ETVLEQQQKS IESLQLAVAD IKGRRPNDWL LAEADYLVKL AGRKLFLEHD
VETATQLMES ADQRIAALND PSLTALRKAM ANDITTLKNI PLIDRDGLVL RLISLQQQID
SLPLANAILP ADQPQTSQAV SENIDDWQTN LKNSLKAFAD NFITFRSRDG NVIPLLSPTQ
HFYLRENLQA KLETAIKGVY TEQQTLYRIA LDTAAQWSTS FFNPDDKAVQ SFNAALAQLA
EQQVQVEYPV KLQAQQQLAD VINERLRRSV SPLTTGAEQ
|
|---|
| |