| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2391 |
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| Symbol | xerC |
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| ID | 5135284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2546338 |
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| End bp | 2547273 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533843 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001218291 |
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| Protein GI | 147673673 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACG ACGAACGCAC CCCGCTTCCT GATGCGTTGG CTCAACCGCT GGAGCGTTTT
TACGCCTACC TGCATACGGA AAAAGGGTTG AGCCTGTATA CCCAGCGCAA TTATAAGCAG
CAGTTGGAAA CCATGACCCA GTACTTAGTA CAGGTTGGGC TCACCCACTG GACACAGCTT
GATTCGGCGT GGGTGCGTCA ATTGGTGATG CAGGGGAAAA GGCAGGGGAT GAAAGCCAGC
AGTATCGCGA CGCGTTTGTC TTCATTGCGC AGTTTCCTGG ATTTTCTGAT TTTACGTGGC
GAGCTTCAGG CTAACCCTGC GAAAGGCGTC TCTGCGCCGC GCAAGCAGCG TACTTTACCG
AAAAATCTCG ATGTTGATGA AATGGCGCAG TTACTGGAAG TGACCGATGA TGATCCGCTT
TCGATTCGCG ATCGGGCGAT CATGGAGCTG ATGTACGGCG CGGGTTTACG TTTGGCTGAG
CTAGTTTCGA TTGATATCAA AGACGTTAAT CTAAGCGAAG GTGAGATCCG CGTCATCGGT
AAAGGCAACA AAGAGCGCAA AGTGTGGTTT GCTGGACAGG CACAAGAGTG GGTCGGTAAA
TGGCTCAAAT TGCGCAGTCA ATTGGCGGAT AGCGCAGAAA CGGCGCTGTT TGTGTCCAAA
CTCGGTACCC GTATTTCACA CCGTAGTGTG CAAAAACGCA TGGCCGAATG GGGCCAAAAA
CAGGCGGTTG CCAGTCATAT CAGCCCACAT AAATTGCGCC ACTCGTTTGC CACCCATATG
CTGGAATCGA GCAATAACCT GCGTGCGGTG CAGGAGCTAC TTGGGCACGA GAACATCGCG
ACAACGCAAA TCTATACCCA CCTCGATTTT CAACATCTGG CTCAGGTGTA TGACCAAGCG
CATCCTCGGG CGCGCAAAAA GAATAAGGAT GACTAA
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| Protein sequence | MKNDERTPLP DALAQPLERF YAYLHTEKGL SLYTQRNYKQ QLETMTQYLV QVGLTHWTQL
DSAWVRQLVM QGKRQGMKAS SIATRLSSLR SFLDFLILRG ELQANPAKGV SAPRKQRTLP
KNLDVDEMAQ LLEVTDDDPL SIRDRAIMEL MYGAGLRLAE LVSIDIKDVN LSEGEIRVIG
KGNKERKVWF AGQAQEWVGK WLKLRSQLAD SAETALFVSK LGTRISHRSV QKRMAEWGQK
QAVASHISPH KLRHSFATHM LESSNNLRAV QELLGHENIA TTQIYTHLDF QHLAQVYDQA
HPRARKKNKD D
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