| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2351 |
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| Symbol | |
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| ID | 5136845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2503295 |
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| End bp | 2504602 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640533803 |
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| Product | protein HipA |
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| Protein accession | YP_001218251 |
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| Protein GI | 147674647 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATAATC CTATACTTTA CGCACATGCC ACAAATAACA ACATGCTTGT GGGGCAGTTT
GTCCAACAGT CGAAGACCAA CTTATCATTT TCATACTCTG ATGAGTGGTT AGCATATGAT
TCAGCCTTTC CGCTTTCGTT AAGCCTGCCG CTCGTAAAGG GAGAATGTGC ATCATTTTAC
GCACTGAATT TTATTCACAA CCTGCTTCCT GACTTGAAAG AAGAACGATT CAGTCTTGCT
CAGTCGGTGG GTGTGCAATC CAACGATGTA TTCACTTTAC TCTCAAAAGT TGGTCACGAT
TGCACGGGCG GCATTTCATT TACTGAGAGT AGGGAGCCGC CAAAGATAGG GTGGAAATAT
CGAGAGATCT CGGCAAGTGA ATTAAATGAA CTCGTTACTC AGCGTAAGTC ATTTCTTCCA
TGTTTTGGTG ACTACAGGCC ATGTATATCT GGTACACAAA GAAAAACCAC GCTGATGAAA
ACAAATGGTA GGTGGTATGT CCCACAGGGA ACCGCGTTCA GTAGTCACAT AGTTAAGTAT
CCGATGGATG TGATTACCCA AAGTAACTCC GTGCTAGATA TGAGTAGCAG CATTGAGAAT
GAATTCATCT GTACTCAAAT AGCAAAGGAA CTTGGTTTTA AAGTCCCCGA CATTGAGATA
ATAACCGCAG AATCAGGAAC TAAAGCCCTT GCAGTAAAAC GGTTCGACCG ATGTTTTGGT
GATGGAGTTG TGACTCGTAG ACACCAAGAA GATTTCTGCC AGATTTTGGG TGTACCTGAA
CATCAAAAAT ATCAATCGGA GAACAACCTA AGTGTCTCCA AAATTGTTGA TGTTTTAAGT
CTCTCTGCGC AAAGCAAGGC GAACAATCAT GACTTTTTTA AATTCATGAT TTTACAGTGC
CTTCTTGGTG CCACTGACGG TCATCTCAAG AATTTTTCCG TGCATATTGA TACTGGCGGA
TACTATAAAC TTGCACCGTT CTACGATTTG CTATCAGCTT ACCCTGCTGT CAGTGCTACA
GGGTTAAATA AGCGCAAGCT AAAACTAGCA ATGGGACTGC AAGCATCACG AGGATACAAA
TACCATATCA GCAAGATTTG CTTACGGCAT ATAGAGCAGA CAGCGAGTCA GTTCGGTATC
AGTAATGCTG AATGCCATGA AATCTTCTAT GCCTTTCTCG CTCAATTTAG TAGCGCACTG
AGTTCTATAG ACAAAAGATT CCCTGGACAG GAGTTTGCGT TGGTAAAGGA TGCAATATTT
CAACATGCCA CTGAAATCGT TGAAAAGTTA AACAGAACAA TTAAGTAA
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| Protein sequence | MHNPILYAHA TNNNMLVGQF VQQSKTNLSF SYSDEWLAYD SAFPLSLSLP LVKGECASFY
ALNFIHNLLP DLKEERFSLA QSVGVQSNDV FTLLSKVGHD CTGGISFTES REPPKIGWKY
REISASELNE LVTQRKSFLP CFGDYRPCIS GTQRKTTLMK TNGRWYVPQG TAFSSHIVKY
PMDVITQSNS VLDMSSSIEN EFICTQIAKE LGFKVPDIEI ITAESGTKAL AVKRFDRCFG
DGVVTRRHQE DFCQILGVPE HQKYQSENNL SVSKIVDVLS LSAQSKANNH DFFKFMILQC
LLGATDGHLK NFSVHIDTGG YYKLAPFYDL LSAYPAVSAT GLNKRKLKLA MGLQASRGYK
YHISKICLRH IEQTASQFGI SNAECHEIFY AFLAQFSSAL SSIDKRFPGQ EFALVKDAIF
QHATEIVEKL NRTIK
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