Gene VC0395_A2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2308 
Symbol 
ID5136428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2462253 
End bp2462636 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content50% 
IMG OID640533763 
Producthypothetical protein 
Protein accessionYP_001218223 
Protein GI147675399 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAATGA GTTCCAGCGC AGAAGAGGTG AGACTGGATA AATGGCTGTG GGCAGCAAGA 
TTTTACAAAA CACGCTCGCT CGCGCGAAAT ATGGTCGAAG GGGGCAAAGT CCACTATAAT
GGCCAGCGCG CCAAACCCAG CAAATCGGTT GAAATTGGAG CGCAAATCAC ATTGCGTCAA
GGTCATGATG AGAAAACGAT CATTATTGAA AAGATCTCAG ACCAACGCCG TGGGGCACCT
GAAGCACAAC AGCTCTATCG CGAAACGGCC AAAAGCATCA CCAAACGTGA ACGCAATGCC
ATGATGCGCC AACTCAACCC GAGTCCGGAT CGACGTCCTG ACAAGAAACA GCGCCGAGAT
CTACTCAAAT TCATCCATCA GTAA
 
Protein sequence
MAMSSSAEEV RLDKWLWAAR FYKTRSLARN MVEGGKVHYN GQRAKPSKSV EIGAQITLRQ 
GHDEKTIIIE KISDQRRGAP EAQQLYRETA KSITKRERNA MMRQLNPSPD RRPDKKQRRD
LLKFIHQ