Gene VC0395_A2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2301 
SymbolepsI 
ID5136644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2454872 
End bp2455225 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content52% 
IMG OID640533756 
Productgeneral secretion pathway protein I 
Protein accessionYP_001218216 
Protein GI147675768 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTA AACGCGGTTT TACTTTGCTT GAAGTGCTGG TCGCGCTGGC AATTTTTGCT 
ACCGCGGCGA TCAGTGTGAT CCGCTCGGTC AGTCAACACA TCAATACGGT CAATTATCTT 
GAAGAGAAGA TGTTTGCGGC CATGGTCGTG GATAACCAAA TGGCGCAAGT GATGCTCAAT 
CCGCAATCTT TAGCGGCGCG TGAGGGCAGT GAGCAGATGG CCGGACGGAC TTGGTACTGG 
AAGCTGAGTC CTGTCAAAAC CGCCGACAAT CTGCTCAAAG CCTTTGATGT CAGTGTCGCC 
ACAGAAAAAG GCGCGACCCC AGTCGTGACG GTGCGTAGCT ATGTGGCGAA CTAA
 
Protein sequence
MKSKRGFTLL EVLVALAIFA TAAISVIRSV SQHINTVNYL EEKMFAAMVV DNQMAQVMLN 
PQSLAAREGS EQMAGRTWYW KLSPVKTADN LLKAFDVSVA TEKGATPVVT VRSYVAN