| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2300 |
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| Symbol | epsJ |
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| ID | 5137418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2454220 |
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| End bp | 2454885 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533755 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001218215 |
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| Protein GI | 147674823 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGCGAA CTAACCAAGT ATCTTCTCGC CAGAATATGG CGGGCTTTAC TTTGATTGAA
GTGTTGGTGG CGATTGCGAT TTTCGCGAGC TTGAGTGTGG GCGCCTATCA GGTGCTCAAT
CAAGTCCAAC GCAGCAATGA AATTTCTGCC GAGCGCACCG CGCGTTTGGC TGAATTGCAA
CGCGCCATGG TGATCATGGA TGCCGATTTT CGGCAGATGG CCCTGCGCCA ATTTCGCACC
GATGGCGAAG CGCCGAGTGA GCAAATCCTA CAATGGAAAG AATCGCTGCT CGATTCGGAT
CAGCACGGTT TGTTGTTTGT ACGCTTGGGT TGGCATAACC CACAGCAACA ATTTCCACGC
GGTGAAGTGG CGAAAGTCGG TTACCGCCTG TTTGAAAACC GCTTAGAGCG GGTCTGGTGG
CGCTACCCAG ATACTCCAGC GGGGCAGCAA GGGCTGATCT CTCCGTTGTT AACTGGGGTG
GAAGATTGGG CAGTACAGTT TTATTTGCAA GGTGAATGGA GTAAGGAGTG GGTGCCCACT
AACGCCTTGC CTGAAGCCGT GAAAGTGACC TTGCGCCTAA AAGATTACGG TGAGATTGAG
CGGATATACC TTACAGGGGG CGGTTCACTC AATATGACGC AAGAGAGTGT TGAAAATGCG
GGCTAA
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| Protein sequence | MWRTNQVSSR QNMAGFTLIE VLVAIAIFAS LSVGAYQVLN QVQRSNEISA ERTARLAELQ
RAMVIMDADF RQMALRQFRT DGEAPSEQIL QWKESLLDSD QHGLLFVRLG WHNPQQQFPR
GEVAKVGYRL FENRLERVWW RYPDTPAGQQ GLISPLLTGV EDWAVQFYLQ GEWSKEWVPT
NALPEAVKVT LRLKDYGEIE RIYLTGGGSL NMTQESVENA G
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