| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2286 |
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| Symbol | ompR |
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| ID | 5137187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2442317 |
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| End bp | 2443039 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533742 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_001218202 |
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| Protein GI | 147673571 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGAAA ATCATAAAGT TTTAGTGGTA GATGATGATG CGCGCTTGCG TGCGCTGCTT
GAGCGTTACC TGTCCGAGCA GGGTTTTCAA GTCCGCAGCG TGGCTAACGG CGAGCAGATG
GATCGTCTGC TGACGCGCGA AAACTTCCAT TTGATGGTGC TGGATTTGAT GTTGCCGGGT
GAAGATGGCT TGTCTATCTG TCGACGTTTG CGCAATTCCA ACAATATGAT CCCGATTCTG
ATGCTCACTG CCAAAGGCGA TGAGATTGAC CGCATTGTCG GCCTAGAAGT TGGTGCCGAT
GATTACCTGC CTAAGCCATT TAACCCACGT GAGTTGCTGG CGCGTATCAA AGCGGTATTG
CGCCGCCAAG TGGTTGAAGC GCCGGGAGCG CCCAGTGCAG AAGAGACCAT CATTGAATTT
GGTGAGTTTC GCTTAAATCT TGGTACGCGA GAAATGTTCC GTGGTGAAGA GGCGATGCCA
CTCACTTCTG GTGAATTTGC TGTGTTGAAA GCACTCGTGA CCAATGCCCG TGAACCGCTT
TCGCGCGATA AACTGATGAA CATGGCGCGT GGCCGTGAAT ATTCAGCGAT GGAGCGTTCG
ATTGACGTAC AGATTTCTCG TCTGCGTCGT ATGCTCGAAG TTGACCCTAG CAAACCGCGC
TATATTCAAA CCGTATGGGG ACTCGGTTAC GTGTTTGTTC CTGATGGTAA AGCCGCCAAC
TAA
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| Protein sequence | MVENHKVLVV DDDARLRALL ERYLSEQGFQ VRSVANGEQM DRLLTRENFH LMVLDLMLPG
EDGLSICRRL RNSNNMIPIL MLTAKGDEID RIVGLEVGAD DYLPKPFNPR ELLARIKAVL
RRQVVEAPGA PSAEETIIEF GEFRLNLGTR EMFRGEEAMP LTSGEFAVLK ALVTNAREPL
SRDKLMNMAR GREYSAMERS IDVQISRLRR MLEVDPSKPR YIQTVWGLGY VFVPDGKAAN
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