Gene VC0395_A2275 details

Gene Information

• Locus tag: VC0395_A2275
• ID: 5135120
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2427844
• End bp: 2428473
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640533731
• Product: LuxR family transcriptional regulator
• Protein accession: YP_001218191
• Protein GI: 147675562
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.314776
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTCGA CCTACACCAT CATCATTGCT GATGACCATC CCCTGTTTCG TAACGCGCTG 
TTTCAATCGG TGCACATGGC GATCAGCGGT GCGAATTTGC TGGAAGCGGA CTCGCTGGAT 
GCTTTGCTCA CCCTACTCAA TAAAGAATCA GAGCCCGACC TGCTGCTGCT GGATCTGAAA 
ATGCCCGGCG CCAATGGCAT GTCAGGTTTG ATTCACTTGC GTTCCGAATA CCCAGATTTA 
CCGATAGTAG TCATTTCCGC TAGTGAAGAA CCTAGCGTGG TATCGCAGGT GAAAAGTCAC 
GGCGTGTTTG GCTTTATTCC AAAATCGAGC GATATGCGCA GCCTGATTGC CGCGCTCAAT 
CAAGTGCTCA ACGGCGAGCC TTATTTCCCC GCACATTTAC TGGTTGATGG CTTTGTCGGT 
AATGACCTAG CGGAAAAAGT CGCCGCGCTG ACTCCGCAGC AATACAAGGT ACTTGGCATG 
CTGTCTGATG GTCTGCTCAA CAAGCAGATT GCTTATGAAT TGAATGTGTC GGAAGCCACC 
ATAAAAGCGC ATATGACGGC CATTTTCCGC AAACTTGGGG TGAAAAACCG CACTCAAGCA 
GTGATCTTGC TAAAAGAAAT GAGCGAGTGA 

 

Protein sequence

MDSTYTIIIA DDHPLFRNAL FQSVHMAISG ANLLEADSLD ALLTLLNKES EPDLLLLDLK 
MPGANGMSGL IHLRSEYPDL PIVVISASEE PSVVSQVKSH GVFGFIPKSS DMRSLIAALN 
QVLNGEPYFP AHLLVDGFVG NDLAEKVAAL TPQQYKVLGM LSDGLLNKQI AYELNVSEAT 
IKAHMTAIFR KLGVKNRTQA VILLKEMSE