| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2208 |
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| Symbol | |
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| ID | 5136176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2356787 |
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| End bp | 2357305 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533664 |
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| Product | putative fimbrial assembly protein PilP |
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| Protein accession | YP_001218124 |
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| Protein GI | 147673518 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00448572 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA AGCCACTTGG ATTATGGCTG ATGAGTTTGC TGGTGTTGGT CGGGTGTAAG
GCGAACCAAG ATGATTTGAC CTCATACGTC GCGCAAGTTG AGCGTGAAGC GCGCAAAGAA
GTAACTAAGC TCAAACCCAT TTTAGAGTTT GAAGCCACGC CCTATCAGCA GCACAAGGGG
CGTGAGCCGT TTGTCTTACC GAAAGAAGCG TTAGTGCAAA ACCAACCGCT GGCCAAAGCC
GACTGTTGGC AACCCGTGCC ACGTGCGAAA AATGGGCCGT TGGAGCGTTA TCCATTGCAC
CAATTGCGCT TAAAAGGGGT GATGAGCAGC GGGGGCAGTA TCTCTGCCTT AGTGCAAACG
CCGGCAGGGA GTGTGGTCAA GGTTAAGGCG GGTCAATATG TCGGAATCAA TAATGGCAAA
GTCACCCGAG TCGACGACAA CTATTTGTTA ATTAATGAAA CTTTGCCTGA TGGCTTAGGG
TGTTGGAATC AGCGTAACGT CAAGCTGGCT TTAAAATAA
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| Protein sequence | MKNKPLGLWL MSLLVLVGCK ANQDDLTSYV AQVEREARKE VTKLKPILEF EATPYQQHKG
REPFVLPKEA LVQNQPLAKA DCWQPVPRAK NGPLERYPLH QLRLKGVMSS GGSISALVQT
PAGSVVKVKA GQYVGINNGK VTRVDDNYLL INETLPDGLG CWNQRNVKLA LK
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