| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2168 |
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| Symbol | rpsC |
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| ID | 5136395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2314584 |
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| End bp | 2315285 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533624 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001218084 |
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| Protein GI | 147673134 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000068862 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCAGA AAGTACATCC AAATGGTATT CGTCTAGGCA TCGTTAAGCC TTGGAATGCT
ACATGGTTTG CTAACACCAA AGATTTCGCT GACAACCTAG ACGGCGACTT CAAGGTACGT
CAATACCTGT CTAAGGAATT GGCAAACGCG TCTCTGTCAC GCATCGTTAT CGAACGTCCT
GCGAAAAGCA TCCGTGTGAC TATTCACACT GCTCGTCCAG GTGTTGTTAT CGGTAAGAAA
GGCGAAGACG TTGAAAAACT GCGTGCAGCA GTAGCAAAAA TTGCTGGCGT ACCAGCGCAA
ATCAACATCG CTGAAGTACG TAAGCCTGAG CTGGATGGTC AGCTTGTGGC TGATAGCATC
GCGTCTCAAC TAGAGCGTCG CGTAATGTTC CGTCGTGCTA TGAAGCGCGC AGTACAAAAC
GCAATGCGCC TAGGCGCTAA AGGTATCAAA GTGGAAGTAA GCGGTCGTTT AGGCGGCGCT
GAAATCGCTC GTTCAGAGTG GTATCGTGAA GGTCGCGTAC CTCTACACAC TCTGCGTGCT
GACATTGATT ACGCAACTTC TTCGGCTCAC ACCACCTACG GTGTAATCGG CGTTAAAGTC
TGGATCTTCA AAGGTGAGAT CCTAGGCGGT ATGCCAGCAG CAACTGAAGC TGCAGAGCCA
AAGGCTGACA AGCCGAAGAA GCAGCGTAAA GGCCGTAAGT AA
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| Protein sequence | MGQKVHPNGI RLGIVKPWNA TWFANTKDFA DNLDGDFKVR QYLSKELANA SLSRIVIERP
AKSIRVTIHT ARPGVVIGKK GEDVEKLRAA VAKIAGVPAQ INIAEVRKPE LDGQLVADSI
ASQLERRVMF RRAMKRAVQN AMRLGAKGIK VEVSGRLGGA EIARSEWYRE GRVPLHTLRA
DIDYATSSAH TTYGVIGVKV WIFKGEILGG MPAATEAAEP KADKPKKQRK GRK
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