| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2158 |
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| Symbol | rplR |
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| ID | 5135836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2310633 |
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| End bp | 2310986 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533614 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001218074 |
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| Protein GI | 147675740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000012582 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AAGCATCTCG CATCCGTCGT GCTACACGTG CACGTCGTAA GATTGCAGAA
CTGGGTGCAA CTCGCCTAGT AGTACACCGT ACTCCTCGTC ATGTGTACGC ACAAGTGATT
GCAGCTAATG GCTCTGAGGT TATCGCCGCC GCTTCTACTG TAGAAAAAGC GATCCGTGAG
CAAGTGAAAT ACACCGGTAA CATCGATGCA GCGAAAGCAG TGGGTAAAGC TGTTGCAGAG
CGCGCACTTG AAAAAGGCGT AACTGTAGTT GCGTTTGATC GTTCTGGTTT CCAATACCAC
GGTCGAGTAG CAGCGCTAGC AGATTCTGCT CGCGAAGCTG GTCTGAAATT CTAA
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| Protein sequence | MDKKASRIRR ATRARRKIAE LGATRLVVHR TPRHVYAQVI AANGSEVIAA ASTVEKAIRE
QVKYTGNIDA AKAVGKAVAE RALEKGVTVV AFDRSGFQYH GRVAALADSA REAGLKF
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