| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2157 |
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| Symbol | rpsE |
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| ID | 5135089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2310115 |
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| End bp | 2310618 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533613 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001218073 |
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| Protein GI | 147675266 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000232198 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAG AACAACAAGT TCAAGCGAAT GATTTGCAAG AAAAATTAAT CGCAGTTAAC
CGTGTTTCTA AAACGGTTAA AGGTGGTCGA ATCATGAGCT TTACTGCACT GACTGTAGTT
GGTGACGGTA ACGGTCGTGT AGGTTTCGGT TACGGCAAAG CCCGTGAAGT ACCTGCTGCG
ATCCAAAAAG CAATGGAAAA AGCACGTCGT AGCATGGTTA CGATCGCGCT GAACGAAGGT
ACTCTTCACC ACCCAGTGAA AGGTCGCCAT TCGGGCTCTA AAGTTTACAT GCAGCCTGCT
GCAGAAGGTA CTGGTGTAAT CGCAGGTGGT GCGATGCGTG CAGTACTTGA AGTTGCTGGT
GTACACAACG TTTTGTCTAA AGCGTACGGT TCTACTAACC CAATCAACAT CGTTCGTGCA
ACGATTGATG CGCTAGTAGA CGTTAAGTCA CCAGAAATGG TTGCTGCTAA ACGTGGTCTA
ACTGTTGAAG CGATTTCGGA GTAA
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| Protein sequence | MAKEQQVQAN DLQEKLIAVN RVSKTVKGGR IMSFTALTVV GDGNGRVGFG YGKAREVPAA
IQKAMEKARR SMVTIALNEG TLHHPVKGRH SGSKVYMQPA AEGTGVIAGG AMRAVLEVAG
VHNVLSKAYG STNPINIVRA TIDALVDVKS PEMVAAKRGL TVEAISE
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