Gene VC0395_A2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2156 
SymbolrpmD 
ID5136774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2309932 
End bp2310108 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content41% 
IMG OID640533612 
Product50S ribosomal protein L30 
Protein accessionYP_001218072 
Protein GI147674502 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000499402 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTA TTAAAGTAAC TCAAACTAAA AGCTCAATTG GTCGCCTGCC AAAGCATAAA 
GCTACACTGC GCGGTTTAGG CCTTCGTAAA ATCAACCACA CAGTAGAACT TGAAGATACG
CCATGTGTTC GTGGCATGAT CAACAAGGTT TACTACATGG TTAAAGTTGA GGAGTAA
 
Protein sequence
MATIKVTQTK SSIGRLPKHK ATLRGLGLRK INHTVELEDT PCVRGMINKV YYMVKVEE