Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2156 |
Symbol | rpmD |
ID | 5136774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2309932 |
End bp | 2310108 |
Gene Length | 177 bp |
Protein Length | 58 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640533612 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001218072 |
Protein GI | 147674502 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000499402 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTA TTAAAGTAAC TCAAACTAAA AGCTCAATTG GTCGCCTGCC AAAGCATAAA GCTACACTGC GCGGTTTAGG CCTTCGTAAA ATCAACCACA CAGTAGAACT TGAAGATACG CCATGTGTTC GTGGCATGAT CAACAAGGTT TACTACATGG TTAAAGTTGA GGAGTAA
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Protein sequence | MATIKVTQTK SSIGRLPKHK ATLRGLGLRK INHTVELEDT PCVRGMINKV YYMVKVEE
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