| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2117 |
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| Symbol | |
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| ID | 5137613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2272184 |
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| End bp | 2272900 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533573 |
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| Product | putative thiamine ABC transporter, ATP-binding protein |
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| Protein accession | YP_001218033 |
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| Protein GI | 147674110 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCTC TAGATAAAGT GCGTTACGAA TATGAGCACG AATGGTTCGA GTTTGATCTG
AACGTGGCTG ATGGCGACAT TGTGGCGCTG ATGGGACCCA GTGGCGCGGG TAAATCTACC
TTGCTCAGTC TGGTGGCGGG TTTTATTGAA CCGGTGAGCG GCAGCATCAA GGTCAATGAT
CAGTCGGTAC TCGGTTTAGC GCCTTATCAA CGCCCTTTTT CGATGCTCTT TCAGGAGCAC
AACCTGTTTG CCCATCTTAC CGTGCGTGAA AACATCGGCT TAGGTTTACA TCCAGGCCTC
AAATTGAACG CTGAGCAGAA ACAGCAAGTG GTTGATGCCG CTCAGCAAGT AGGAATTGCC
GACTACCTAG ATCGTTTACC TGAGCAACTT TCCGGCGGGC AACGCCAGAG GGTGGCACTC
GCGCGCTGTT TTGTGCAGCC GAATCCGATT TGGTTGCTTG ATGAGCCATT TTCGGCGCTC
GATCCTTTGC TGCGTGAAGA GATGCTTGCT TTGGTAAAAC AGTTAGCCAG TGAGCGGCAG
CGCACTGTTG TGATGGTGAC CCACCATCTT AGTGATGCGC GTGCCATCGC CAGCCAAATC
GCATTTTTGA GCCAAGGTAA AGTGAAGGTG GTGAGTGATT GTCAGGCAGT GACAGCGCAG
CATCCTCATC CTGAACTGGC TCAGTTTGTG GCGGCGGCAC TGAGTGAGCC GAAATAA
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| Protein sequence | MLALDKVRYE YEHEWFEFDL NVADGDIVAL MGPSGAGKST LLSLVAGFIE PVSGSIKVND
QSVLGLAPYQ RPFSMLFQEH NLFAHLTVRE NIGLGLHPGL KLNAEQKQQV VDAAQQVGIA
DYLDRLPEQL SGGQRQRVAL ARCFVQPNPI WLLDEPFSAL DPLLREEMLA LVKQLASERQ
RTVVMVTHHL SDARAIASQI AFLSQGKVKV VSDCQAVTAQ HPHPELAQFV AAALSEPK
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