Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2116 |
Symbol | |
ID | 5137804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2271499 |
End bp | 2272080 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533572 |
Product | hypothetical protein |
Protein accession | YP_001218032 |
Protein GI | 147673507 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGA ATATGGCACG TAAAAACCAA AAAGCCCCTT GGGAAGAGGA AGAAGAGATC ATTTGGGTCA GTAGAACCGA AATGAAAAAT GACATGCTAG CCTTGCAAAA GCTCGGCGAA GAGCTGGTTG AATTAAAACC TTCCGCGTTA GCCAAATTCC CACTGCCAGA AGATCTGGCT GAAGCGATCA AAGATGCGCA GCGTTTTAAA AACGAAGCTC GTCGCCGCCA ACTGCAATAC ATTGGCAAAC TGATGCGCCA TATTGACCCA GAGCCACTGC AAGCGGCACT GGATAAGCTG CGTAACAAGC ACTCGCAAAC CACTGCATTA CTGCACAAAC TGGAGCAACT GCGTGATCGC ATCGTTGCCG AAGGGGATAG CGCGATTGAA GTGGCGATGG AGCAATACCC AGAAGCGGAT CGTCAACGTC TGCGTCTGTT AGCGCGTCAA GCCAGCAAAG AAAAAGCGGG CAACAAGCCG CCAAAATCGT CTCGCGAGAT CTTCCAACTG CTGAAAGAAG CGATGTTGGC AAAACAAGAG ATCGAAGAAG AGAGTGAAGA CGATCTGGAT TCAGCGGAAT AA
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Protein sequence | MMKNMARKNQ KAPWEEEEEI IWVSRTEMKN DMLALQKLGE ELVELKPSAL AKFPLPEDLA EAIKDAQRFK NEARRRQLQY IGKLMRHIDP EPLQAALDKL RNKHSQTTAL LHKLEQLRDR IVAEGDSAIE VAMEQYPEAD RQRLRLLARQ ASKEKAGNKP PKSSREIFQL LKEAMLAKQE IEEESEDDLD SAE
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