Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2104 |
Symbol | |
ID | 5135861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2261722 |
End bp | 2262702 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533560 |
Product | hypothetical protein |
Protein accession | YP_001218020 |
Protein GI | 147674957 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGATGC CCCATTCATT TGATTACCAA ACGGTCGCTA AACAAGTGCT AGCAACCGAA ATCCATGCAT TGCAACAGCT AGAGCAGTAC ATCAATGAGG ATTTTGCGCG TGCTTGTGCG ATGATTTTGG CCAATCAAAC GGGCAAAGTC GTGGTGATGG GGATGGGCAA ATCAGGCCAC ATTGGTAAGA AAATTGCCGC CACCTTAGCC AGTACAGGAA CGTCTGCCTT TTTTGTACAT CCGGGTGAAG CTTCACATGG GGATCTCGGG ATGATTGAGC GTGGCGATAT CGTACTCGCC ATCTCTAATT CCGGAGAATC ATCAGAAATC CTCGCCCTGC TTCCCGTGCT CAAGCGCTTG AGTATTCGCG TGATCAGCAT GACAGGCAAC CCCAACTCTA ATATGGCGAA ATTAGCCGAT ATCCATCTGC AAATCACCGT ACCGCGCGAA GCTTGCCCGT TAGAGCTTGC GCCAACCTCA AGCACCACCG CCACTCTTGT AATGGGCGAT GCGTTGGCGG TGGCTCTGAT GCAAGCACGC GGTTTCACCG CAGAAGATTT TGCTTTGTCT CACCCAGGTG GCGCACTTGG GCGTAAACTC TTGCTCAAAC TCAATGACAT CATGCACAGT GGTGATGCAC TGCCTAAAGT GGCACCACAA GCCTTGATCC GAGATGCTTT GCTCGAAATC AGTCAAAAAG GGCTTGGCAT GACAGCCATT GTCGATGAAC AAGACACCCT ACTCGGTATT TTTACTGACG GTGATTTACG GCGCATTCTT GATAAACGCA TCGATATTCA CAGCACTGTG ATTGCCGATG TGATGACGCG CCAACCAACC GTTGCTCAGC CCAATTTGCT GGCCGTGGAA GGATTGAATT TAATGCAGGC CAAACGCATT AATGGCCTGA TGCTCGTTGA AAATAATAAA TTGGTCGGTG CACTGAACAT GCACGATCTA CTCAAAGCCG GAGTGATGTA A
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Protein sequence | MRMPHSFDYQ TVAKQVLATE IHALQQLEQY INEDFARACA MILANQTGKV VVMGMGKSGH IGKKIAATLA STGTSAFFVH PGEASHGDLG MIERGDIVLA ISNSGESSEI LALLPVLKRL SIRVISMTGN PNSNMAKLAD IHLQITVPRE ACPLELAPTS STTATLVMGD ALAVALMQAR GFTAEDFALS HPGGALGRKL LLKLNDIMHS GDALPKVAPQ ALIRDALLEI SQKGLGMTAI VDEQDTLLGI FTDGDLRRIL DKRIDIHSTV IADVMTRQPT VAQPNLLAVE GLNLMQAKRI NGLMLVENNK LVGALNMHDL LKAGVM
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