Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2094 |
Symbol | |
ID | 5135987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2254280 |
End bp | 2254669 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533550 |
Product | hypothetical protein |
Protein accession | YP_001218010 |
Protein GI | 147673847 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAG TTCTGCATAC TGACGCGGCT CCGGCAGCCA TTGGCCCATA CATTCAAGGT GTTGATCTTG GCAACATGGT ACTGACGTCT GGTCAAATCC CAGTGAATCC AGCCACGGGT GAAATTCCTG CGGATATCGC TGCGCAAGCT CGCCAATCAC TGGATAACGT GAAAGCCGTG GTTGAAGCCT CTGGCCTAAC CGTCGGTGAC ATTGTAAAAA TGACCGTATT CGTCAAAGAT CTCAACGACT TCGGCACAGT AAACCAAGTG TACGGCGCAT TCTTTGATGA GCATAAAGTG GCGCACTACC CAGCGCGTTC TTGTGTTGAA GTGGCACGTC TGCCAAAAGA TGTGGGCATC GAAATCGAAG CGATCGCAGT ACGCAAGTAA
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Protein sequence | MTKVLHTDAA PAAIGPYIQG VDLGNMVLTS GQIPVNPATG EIPADIAAQA RQSLDNVKAV VEASGLTVGD IVKMTVFVKD LNDFGTVNQV YGAFFDEHKV AHYPARSCVE VARLPKDVGI EIEAIAVRK
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