Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2066 |
Symbol | leuB |
ID | 5136609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2225013 |
End bp | 2226104 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533523 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_001217990 |
Protein GI | 147674369 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGACA GAGATTACAA AATTGCCGTA TTACCCGGCG ACGGTATCGG CCCGGAAGTG ATGGCACAAG CCCACAAAGT GTTGGATGCG ATTGAGCAAA AACACGGCAT TCGTTTCAGT CGTGAAGAGC ACGATGTTGG TGGTATTGCG ATTGATAACC ATGGTTGCCC ACTGCCAGAA AGCACTCTGC GTGCCTGTGA AGAAGCGGAT GCGGTCTTGT TTGGTTCCGT CGGAGGGCCA AAATGGGAAC ATCTGCCACC TAACGAGCAA CCTGAACGCG GTGCTTTGCT ACCACTGCGT AAGCACTTCC AACTGTTTTG TAATTTGCGC CCCGCGCAGA TCCACCAAGG TCTGGAAGCC TTTTCGCCCC TACGTGCTGA TATCTCTGCT CGCGGTTTCG ATATTGTGGT GGTACGTGAG CTGACTGGCG GCATTTACTT TGGTCAACCC AAAGGCCGTG AAGGTGAAGG CGCTCATGAA AAAGCGTTCG ATACTGAGGT TTACCACCGT TTTGAAATTG AACGTATCGC GCGAATCGCC TTTGAGTCGG CTCGCTTGCG TCGTAAGAAA GTCTGCTCTA TCGACAAAGC TAACGTGCTG CAAAGCTCAA TACTGTGGCG CGAAGTGGTC AGCGAAATTG CCAAAGAGTA TCCCGATGTC TCGCTTTCAC ACATGTACAT CGATAATGCC ACCATGCAAC TTATCAAAGA TCCAGCACAG TTCGATGTGA TGCTCTGCTC GAACATTTTT GGCGACATCC TTTCTGATGA ATGCGCGATG ATCACAGGCT CCATGGGCAT GCTCCCTTCG GCCAGTATGA ATGAGAGCAA GTTTGGCTTG TACGAACCAG CGGGCGGCAG CGCGCCAGAT ATCGCAGGCA AAAACATCGC CAACCCTGTC GCGCAGATCT TATCTGCGGC ACTCATGCTG CGTTACAGCT TAGGTGAAGA AGCGGCAGCG CGTGATATTG AAAACGCGGT TAGCCAAGCA TTAGCAGCAG GTGAACTGAC GGCGGATCTC GCAGGCAGTA AACCAGCCCT ATCGACCTCA GCAATGGGCG ATAAAATCGC AAGCTATATT TTGAATTCAT AA
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Protein sequence | MTDRDYKIAV LPGDGIGPEV MAQAHKVLDA IEQKHGIRFS REEHDVGGIA IDNHGCPLPE STLRACEEAD AVLFGSVGGP KWEHLPPNEQ PERGALLPLR KHFQLFCNLR PAQIHQGLEA FSPLRADISA RGFDIVVVRE LTGGIYFGQP KGREGEGAHE KAFDTEVYHR FEIERIARIA FESARLRRKK VCSIDKANVL QSSILWREVV SEIAKEYPDV SLSHMYIDNA TMQLIKDPAQ FDVMLCSNIF GDILSDECAM ITGSMGMLPS ASMNESKFGL YEPAGGSAPD IAGKNIANPV AQILSAALML RYSLGEEAAA RDIENAVSQA LAAGELTADL AGSKPALSTS AMGDKIASYI LNS
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