Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2024 |
Symbol | cca |
ID | 5137140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2178485 |
End bp | 2179696 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640533481 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | YP_001217948 |
Protein GI | 147674076 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000162176 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT ACCTCGTTGG CGGCGCAGTG CGCGATCAAT TGCTGCAACT TCCGGTTTAT GACCGTGATT GGGTAGTGGT CGGCAGCAGT CCACAAGCTA TGTTAGCGGC AGGCTTTCAA GCTGTCGGGA AAGATTTTCC GGTGTTTTTG CATCCGAACA GTAAAGAAGA ACATGCCCTT GCCCGTACCG AACGCAAAAC CGGCGTAGGT TACACCGGCT TTGCTTGCCA CTATGCTCCA GACGTGAGTT TGGAAGACGA TCTGCTGCGC CGCGATCTGA CCATCAACGC GATGGCGCAA GATAACTCTG GGCAACTGAT TGATCCTTAT GGCGGTCAGC GCGATCTCGC CGCGAAAGTG CTGCGCCATG TTTCGCCCGC GTTTGTGGAA GATCCCTTGC GTGTGCTGCG CGTGGCGCGC TTTGCGGCTA AGCTGCATCA CCTAGGTTTC ACCGTTGCCG AAGAGACGAT GCAATTAATG GCGAAGATTG TGCAATCGGG CGAGTTGCAG CACTTAACCG CCGAGCGTGT GTGGCAAGAG TGGCATAAAT CGCTCTCGAC GAATCATCCC GAAGTGTTTT TGCAGGTGTT ACGTGATTGT GGCGCGCTGG CGGTGGTGCT GCCTGAAATC GATCGCTTGT TCGGCGTGCC ACAACCGGAA AAATGGCACC CAGAGATCGA CACCGGCATT CACACGCTAA TGGTCGCCAA GCAAGCCGCA CAACTTTCTG ATTCCCTTCC CGTGCGTTTT GCCGCGCAAG TGCATGATTT AGGAAAAGGC GTGACGCCAC CTTCTGAATG GCCAAGCCAT AAATTGCACT GCCATACTGG GCTTAATATC ATTGAATCAT TGTGCGAGCG CATTCGCGTG CCTAATGAGT TTCGTGATTT AGCGCTCGCG GTGTGCGCGC AGCATTCCAA TATCCATCGT GCGGACGAGT TAAAGCCTAC CACCAAGCTG AAAGTGCTGG GGCTTTTGGA TGTGTGGCGC AAACCGGAGC GTCTTGAGCA AGTGCTACTG TGTTGTGAAG CAGATCATCG TGGCCGTTTA GGTTTAGAGA ATGAGCCGTA TCCGCAGCGT GAGATTTTCC TGCGTGCCTA CCAAGCCGCC CTTGGGGTAG CAGTTCAAGC CGTGATAGCG GATGGCTTTC ACGGCAAGCA GATCAAAGAA GAGTTGGATA AACGGCGCGT ATCGGCAATC GAGGCTCTGT AG
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Protein sequence | MQIYLVGGAV RDQLLQLPVY DRDWVVVGSS PQAMLAAGFQ AVGKDFPVFL HPNSKEEHAL ARTERKTGVG YTGFACHYAP DVSLEDDLLR RDLTINAMAQ DNSGQLIDPY GGQRDLAAKV LRHVSPAFVE DPLRVLRVAR FAAKLHHLGF TVAEETMQLM AKIVQSGELQ HLTAERVWQE WHKSLSTNHP EVFLQVLRDC GALAVVLPEI DRLFGVPQPE KWHPEIDTGI HTLMVAKQAA QLSDSLPVRF AAQVHDLGKG VTPPSEWPSH KLHCHTGLNI IESLCERIRV PNEFRDLALA VCAQHSNIHR ADELKPTTKL KVLGLLDVWR KPERLEQVLL CCEADHRGRL GLENEPYPQR EIFLRAYQAA LGVAVQAVIA DGFHGKQIKE ELDKRRVSAI EAL
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