| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1999 |
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| Symbol | pilA |
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| ID | 5136925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2150376 |
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| End bp | 2150837 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640533456 |
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| Product | fimbrial protein |
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| Protein accession | YP_001217923 |
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| Protein GI | 147674494 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCGT ATAAAAACAA ACAACAGAAA GGTTTTACCT TAATTGAATT GATGATTGTG
GTGGCAGTGA TTGGTGTGTT GGCAGCGATT GCAATTCCTC AATATCAAAA TTATGTAAAA
AAATCAGCTA TTGGGGTTGG CTTAGCAAAC ATCACAGCAC TGAAAACTAA TATTGAAGAT
TATATTGCGA CAGAAGGCTC TTTTCCTGCA ACAACTGCAG GTACGGCCGC AGGATTTACA
CGCTTAGGTA CTGTTGAAGA CATGGGTGAC GGTAAGATTG TAATTGCCCC AACAGCATCA
GGTGCATTAG GAGGTACAAT AAAATACACA TTCGATGCTG GTGTAGTATC TAGTTCAAAA
ATCCAATTAG CAAGAGATGC CAATGGATTA TGGACTTGTA GTACCACCGT TACTAGTGAA
ATAGCACCAA AAGGCTGTAC TGCAGGTGCA ACAATTAACT AA
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| Protein sequence | MKAYKNKQQK GFTLIELMIV VAVIGVLAAI AIPQYQNYVK KSAIGVGLAN ITALKTNIED
YIATEGSFPA TTAGTAAGFT RLGTVEDMGD GKIVIAPTAS GALGGTIKYT FDAGVVSSSK
IQLARDANGL WTCSTTVTSE IAPKGCTAGA TIN
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