Gene VC0395_A1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1985 
SymbolftsI 
ID5137359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2130748 
End bp2132490 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content52% 
IMG OID640533442 
Productpenicillin-binding protein 3 
Protein accessionYP_001217909 
Protein GI147674985 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA AAGCCCCAGC CAAAGCCTCC CGAGTTTCTC CCCGTGTTAC CACGGCTGAG 
CCTGCACCTA TCTTTATCCG CTGGCGTTTC TATCTGCTGC TGTTTTTTGT GCTAACGGCG
TTCTGCGCTT TGGTTGCACG AGTGGCTTAT ATCCAAATTA TTGAACCTGA CAATCTGATT
AAAGAAGGGG ATTTGCGCTC GATTCGCGCC AAAACCTTGC AATCAGCGCG CGGCATTATT
TCCGATCGTA ATGGCGAAGC GTTAGCGGTG AGTGTGCCAG TCGAAGCGGT CTGGGCCGAT
CCTGTCGCTA TTTATAAAGA AGGCGGTCTG GTTGAGAAAG ACCGTTGGTA TGCGCTGGCC
GATGTGCTCG GACTGGATCG TCAGGAGATG ATGAAGAAAA TCGAGGATAA CCGTTCGCGC
CGCTTTATCT ATCTGCAACG TCAGGTTAGC CCTGCGATGG CCAAATACAT CCGTGAACTC
AAATTAGCGG GGATTGGCCT AAAAGAAGAG TCACGCCGCT ATTATCCCGC AGGTGAGGTG
AGTGCCCACT TAGTCGGGGT GACCGGAATT GATGGCCACG GTCTTGAAGG GGTAGAGCGC
AGCTTTGATA GCACCTTAAC GGGTGAGTCA GGTAAAAGCG TGACGCGTAA AGATAAGTTC
GGGCGAGTGG TGGAAAACAT TGCCCTGGAA GAGCGTGAAG AAGGTAAGCC TATCCAGCTC
ACCATTGACC AGCGCTTACA AGCGATCGCT TTTCGTGCCG TGAAACAGGC GATGGCGGAT
TATCGTGCGA CTTCTGCATC GGCAGTGATG TTGGATGTGA AAACCGGCGC GGTACTGGCG
ATGGTGAATG CGCCTTCTTA CAACCCGAAT AATCGCAATG ACTGGCAAAG CTTTAAAATG
CGTAACCGAG TGATAACCGA TGCGTTTGAA CCCGGTTCAA CGGTTAAGCC TTTTGTGGTC
TTGGCGGCGC TCGCCAATGG TATCGCCGAC AAAAACACCA TCATAGATAC CGGAGATGGC
ACCATGCAGA TTGGCGGTAG CCGCGTGCGT GATACCTCCA AAGTTGGCAA AGCCGATCTC
ACGCTGATTT TGAAAAAGTC GAGCAACATT GGTGTGGCTA AATTAGCCTT AGAAATGCCG
TTAGAGGCGT TATTGGGCAT GTATAGCTCG GTGGGCTTGG GCGAAATGTC TGGCTTGGAT
TTGGTGGGCG AAACGATCGG TATTTTCCCG AATCGCCGCC GTTGGTCACA GTTTGAAATC
GCCACCTTAT CGTTTGGCTA TGGTTTGGCG ATCACGCCTA TTCAGTTGGC TCACGCCTAC
GCGACCTTAG GCAACCATGG TAAATACCAA CCTATTCATA TTATTAAAGG TGATCAACAT
GGCGAGACGC GCCAAGTGGT TGATCCTAAA TATGTCAATC AGGTGCTCGA AATGCTGGAA
ACGGTAACTC AGCCCGGCGG AACGGCAACG CGTGCAGCGG TACCGGGGTA TCGTATTGCG
GCCAAATCCG GTACGTCACG TAAAGCGATT GCGGGCGGTT ATAGTGATGA ATATTTTGCC
TACACCGCAG GGGTGGCTCC GGTGAGCGAC CCAAGAATTT CACTGGTGGT CATGGTCAAT
GAGCCGCAAG GCGACTCTTA CTATGGCGGC GCAGTGGCCG GTCCGGTTTT CTCGGAAATC
ATGAAGGGCG CATTACAAAT CCTCAACATT GCTCCTGATG AAAACCGCTT CCAAAACAAA
TAA
 
Protein sequence
MKKKAPAKAS RVSPRVTTAE PAPIFIRWRF YLLLFFVLTA FCALVARVAY IQIIEPDNLI 
KEGDLRSIRA KTLQSARGII SDRNGEALAV SVPVEAVWAD PVAIYKEGGL VEKDRWYALA
DVLGLDRQEM MKKIEDNRSR RFIYLQRQVS PAMAKYIREL KLAGIGLKEE SRRYYPAGEV
SAHLVGVTGI DGHGLEGVER SFDSTLTGES GKSVTRKDKF GRVVENIALE EREEGKPIQL
TIDQRLQAIA FRAVKQAMAD YRATSASAVM LDVKTGAVLA MVNAPSYNPN NRNDWQSFKM
RNRVITDAFE PGSTVKPFVV LAALANGIAD KNTIIDTGDG TMQIGGSRVR DTSKVGKADL
TLILKKSSNI GVAKLALEMP LEALLGMYSS VGLGEMSGLD LVGETIGIFP NRRRWSQFEI
ATLSFGYGLA ITPIQLAHAY ATLGNHGKYQ PIHIIKGDQH GETRQVVDPK YVNQVLEMLE
TVTQPGGTAT RAAVPGYRIA AKSGTSRKAI AGGYSDEYFA YTAGVAPVSD PRISLVVMVN
EPQGDSYYGG AVAGPVFSEI MKGALQILNI APDENRFQNK