| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1944 |
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| Symbol | |
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| ID | 5136852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2076569 |
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| End bp | 2077057 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640533402 |
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| Product | ribonuclease activity regulator protein RraA |
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| Protein accession | YP_001217869 |
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| Protein GI | 147674216 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR01935] RraA famliy |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000472167 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGAG ATATAACCCC AGATCTTTGC GATAAGTACG AATCGCAAGT CACCTTACTC
AATTTACCGC TGCAAAATTT TGGTCAACGC AGCGCATTTT GGGGCGAAAT AGTGACAGTT
CGTTGCTATC ACGACAACTC TAAAGTACGT GATGTGCTCA GCCAAAATGG CAAGGGCAAA
GTATTGGTTG TGGATGGTCA CGGTTCATGC CACAAAGCCT TAATGGGTGA TCAGTTGGCG
ATTTTAGCCA TCAAAAATGA TTGGGAAGGC GTAATTATTT ACGGCGCAGT GCGTGATGTG
GTCGCAATGT CTGAGATGGA TTTAGGCATC AAAGCATTAG GCACAAGTCC CTTCAAAACC
GAAAAGCGCG GCGCAGGGCA GGTGAATGTC ACTTTGACGA TGCAAAATCA GATCGTTGAA
CCGGGCGATT ATTTGTATGC CGATTGGAAT GGTATTTTGA TGTCAGAAAC GGCGCTTGAT
GTAGCTTAA
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| Protein sequence | MMRDITPDLC DKYESQVTLL NLPLQNFGQR SAFWGEIVTV RCYHDNSKVR DVLSQNGKGK
VLVVDGHGSC HKALMGDQLA ILAIKNDWEG VIIYGAVRDV VAMSEMDLGI KALGTSPFKT
EKRGAGQVNV TLTMQNQIVE PGDYLYADWN GILMSETALD VA
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