Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1884 |
Symbol | nqrA |
ID | 5136504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2002774 |
End bp | 2004162 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533341 |
Product | Na(+)-translocating NADH-quinone reductase subunit A |
Protein accession | YP_001217808 |
Protein GI | 147674300 |
COG category | [C] Energy production and conversion |
COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000568593 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCAATG AAAGAATCTT TTTCCCGATA AAAGTAGTGC AAGTGCGTAT GATTACAATA AAAAAGGGAT TGGACCTTCC TATCGCAGGA ACTCCTTCCC AGGTGATTAG TGATGGTAAA GCCATCAAAA AAGTCGCCTT GCTTGGCGAA GAGTACGTTG GCATGCGTCC TACTATGCAT GTCCGCGTAG GTGATGAAGT AAAAAAAGCT CAGATTCTTT TTGAAGATAA GAAGAATCCG GGTGTGAAAT TTACTTCACC AGTCAGCGGT AAAGTGGTTG AAATCAATCG TGGTGCAAAG CGCGTTCTTC AGTCTGTAGT GATTGAAGTG GCGGGTGATG ACCAAGTGAC CTTCGACAAG TTTGAAGCCA ATCAATTAGC CAGTTTGAAT CGCGATGCGA TCAAAACTCA GCTGGTTGAG TCTGGTCTTT GGACTGCTTT CCGTACTCGT CCGTTCAGCA AGGTTCCAGC CATTGATTCC ACTTCTGAAG CCATTTTTGT CACTGCTATG GATACCAATC CGTTGGCAGC TGAGCCGACC GTTGTGATCA ATGAACAATC TGAAGCCTTC GTTGCTGGTC TAGATGTGCT TTCCGCACTG ACAACTGGCA AAGTGTACGT TTGTAAAAAA GGCACCAGCT TGCCACGTTC TCAACAGCCG AATGTTGAAG AACATGTCTT TGACGGCCCA CATCCTGCAG GCTTAGCTGG CACTCACATG CATTTCCTCT ATCCAGTAAG TGCAGACCAC GTGGCGTGGA GCATCAACTA TCAGGACGTG ATCGCAGTAG GTCAACTGTT CCTGACGGGC GAGCTATACA CCCAGCGTGT GGTTTCTCTT GCCGGCCCGG TGGTGAACAA ACCTCGTTTG GTTCGCACTG TCATGGGCGC ATCACTAGAG CAACTGGTGG ACAGCGAAAT CATGCCTGGC GAAGTACGCA TCATCTCTGG CTCTGTGCTG TCTGGTACGA AAGCCACTGG ACCACACGCT TATCTTGGTC GTTACCACCT ACAGGTCTCT GTTCTTCGTG AAGGACGTGA TAAAGAACTG TTTGGTTGGG CGATGCCGGG TAAGAACAAG TTCTCTGTGA CTCGCTCTTT CCTTGGTCAC CTATTCAAGG GCCAAGTGTA CAACATGACC ACAACCACTA ATGGTAGTGA TCGATCTATG GTTCCAATCG GTAACTATGA GAAGGTCATG CCACTAGATA TGGAGCCAAC CTTGTTGCTT CGTGATCTGT GTGCTGGTGA CAGTGACAGC GCGGTTCGCT TAGGTGCTTT AGAGCTGGAT GAAGAAGATC TAGCACTGTG TACGTTCGTT TGCCCAGGCA AATACGAGTA CGGTCAGCTC CTGCGTGAGT GCTTAGACAA GATCGAGAAA GAAGGGTAA
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Protein sequence | MRNERIFFPI KVVQVRMITI KKGLDLPIAG TPSQVISDGK AIKKVALLGE EYVGMRPTMH VRVGDEVKKA QILFEDKKNP GVKFTSPVSG KVVEINRGAK RVLQSVVIEV AGDDQVTFDK FEANQLASLN RDAIKTQLVE SGLWTAFRTR PFSKVPAIDS TSEAIFVTAM DTNPLAAEPT VVINEQSEAF VAGLDVLSAL TTGKVYVCKK GTSLPRSQQP NVEEHVFDGP HPAGLAGTHM HFLYPVSADH VAWSINYQDV IAVGQLFLTG ELYTQRVVSL AGPVVNKPRL VRTVMGASLE QLVDSEIMPG EVRIISGSVL SGTKATGPHA YLGRYHLQVS VLREGRDKEL FGWAMPGKNK FSVTRSFLGH LFKGQVYNMT TTTNGSDRSM VPIGNYEKVM PLDMEPTLLL RDLCAGDSDS AVRLGALELD EEDLALCTFV CPGKYEYGQL LRECLDKIEK EG
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