| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1882 |
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| Symbol | nqrC |
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| ID | 5136315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2000761 |
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| End bp | 2001534 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533339 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit C |
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| Protein accession | YP_001217806 |
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| Protein GI | 147673911 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
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| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00139648 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCA ATAACGATAG CATTAAAAAG ACGCTGTTTG TTGTTATCGC GTTGAGCCTA
GTGTGCTCAA TCATTGTATC GGCAGCGGCT GTCGGTCTGC GTGACAAGCA AAAAGAAAAT
GCGGCATTAG ACAAGCAGAG CAAGATCCTG CAAGTGGCTG GCATTGAAGC GAAAGGCAGT
AAACAAATCG TTGAATTGTT CAATAAAAGC ATTGAACCAC GTCTGGTTGA CTTCAACACG
GGTGACTTTG TTGAAGGCGA TGCAGCTAAC TACGATCAAC GTAAAGCAGC GAAAGAAGCC
TCTGAATCTA TCAAGCTGAC CGCTGAACAA GATAAAGCGA AGATCCAACG TCGTGCGAAT
GTTGGTGTGG TTTATCTGGT GAAAGACGGC GACAAAACCA GCAAGGTGAT TCTGCCTGTA
CACGGTAACG GCCTATGGTC GATGATGTAC GCGTTTGTAG CAGTAGAAAC TGACGGTAAC
ACGGTTTCAG GTTTGACCTA CTATGAACAA GGTGAAACAC CGGGATTGGG TGGCGAAGTT
GAAAACCCAG CTTGGCGTGC TCAATGGGTC GGTAAAAAGC TGTTTGATGA AAACCACAAA
CCTGCGATCA AGATTGTCAA AGGTGGTGCA CCTCAAGGTT CAGAGCATGG CGTAGACGGT
CTGTCTGGCG CAACTTTGAC CAGTAATGGC GTACAAAACA CCTTCGACTT CTGGTTGGGT
GATATGGGCT TTGGTCCATT CCTGACAAAA GTTCGTGACG GAGGTCTTAA CTAA
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| Protein sequence | MASNNDSIKK TLFVVIALSL VCSIIVSAAA VGLRDKQKEN AALDKQSKIL QVAGIEAKGS
KQIVELFNKS IEPRLVDFNT GDFVEGDAAN YDQRKAAKEA SESIKLTAEQ DKAKIQRRAN
VGVVYLVKDG DKTSKVILPV HGNGLWSMMY AFVAVETDGN TVSGLTYYEQ GETPGLGGEV
ENPAWRAQWV GKKLFDENHK PAIKIVKGGA PQGSEHGVDG LSGATLTSNG VQNTFDFWLG
DMGFGPFLTK VRDGGLN
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