Gene VC0395_A1880 details

Gene Information

• Locus tag: VC0395_A1880
• Symbol: nqrE
• ID: 5136378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1999525
• End bp: 2000121
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640533337
• Product: Na(+)-translocating NADH-quinone reductase subunit E
• Protein accession: YP_001217804
• Protein GI: 147674521
• COG category: [C] Energy production and conversion
• COG ID: [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
• TIGRFAM ID: [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.113927
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACATT ATATTAGTCT GCTGGTGAAA TCGATTTTCA TCGAGAACAT GGCACTCTCT 
TTCTTCCTAG GGATGTGTAC ATTCTTGGCG GTGTCGAAGA AAGTTAAGAC ATCATTCGGC 
TTAGGTATTG CGGTAATCGT AGTACTGACT ATCTCTGTAC CAGTTAACAA TCTGGTGTAC 
AACCTTGTGC TTAAGCCAGA TGCACTGGTT GAAGGGGTAG ATCTTAGCTT CCTCAACTTT 
ATTACCTTTA TCGGTGTTAT TGCGGCATTA GTACAGATTC TGGAAATGAT CCTCGATCGC 
TTCTTCCCGC CTCTGTATAA CGCACTGGGC ATCTTCCTTC CGCTGATCAC AGTAAACTGT 
GCGATCTTCG GTGGTGTGTC TTTCATGGTG CAGCGCGACT ACAGCTTTGC TGAATCAGTG 
GTATACGGTT TCGGTTCTGG TGTGGGTTGG ATGCTGGCTA TCGTCGCTCT TGCAGGTATC 
CGTGAGAAGA TGAAGTATTC AGACGTTCCT CCAGGTCTGC GTGGTTTAGG TATTACCTTT 
ATCACGGCTG GCTTGATGGC GTTGGGCTTC ATGTCTTTCT CTGGTGTTCA ACTGTAA 

 

Protein sequence

MEHYISLLVK SIFIENMALS FFLGMCTFLA VSKKVKTSFG LGIAVIVVLT ISVPVNNLVY 
NLVLKPDALV EGVDLSFLNF ITFIGVIAAL VQILEMILDR FFPPLYNALG IFLPLITVNC 
AIFGGVSFMV QRDYSFAESV VYGFGSGVGW MLAIVALAGI REKMKYSDVP PGLRGLGITF 
ITAGLMALGF MSFSGVQL