Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1876 |
Symbol | dinP |
ID | 5137049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1995674 |
End bp | 1996756 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640533333 |
Product | DNA polymerase IV |
Protein accession | YP_001217800 |
Protein GI | 147674154 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACA GAATTCGTAA AATCATCCAT GTCGATATGG ACTGCTTTTT CGCTGCCGTT GAAATGCGGG ATAACCCTGC GTATCGAGAG ATAGCACTGG CCGTGGGCGG ACATGAAAAG CAGCGTGGAG TGATCAGTAC ATGCAACTAT CAGGCGCGCA AATTTGGCGT TCGTTCTGCT ATGCCTACCG CTCAGGCATT AAAACTCTGC CCACAACTGC ATGTCGTCCC GGGGCGGATG TCTGTCTACA AAAGTGTTTC TCAACAAATC CAAACTATTT TTCAGCGTTA TACCTCGTTG ATTGAGCCTC TTTCACTTGA TGAGGCCTAT CTTGATGTCA GTGAATCGAC TGCCTATCAA GGTAGTGCGA CCTTAATTGC TCAAGCGATT CGACGTGATA TCTGGCAAGA GTTGAATTTA ACGGCGTCCG CTGGTGTTGC GCCGATCAAG TTTCTTGCAA AAGTTGCGTC CGACTTAAAT AAACCTAATG GCTTGTATGT GGTGACGCCT GACAAAGTTC AGGAGATGGT CGATAGTTTG CCGCTGGAAA AGATTCCGGG TGTTGGCAAA GTGGCGTTAG AAAAGCTGCA TCAAGCCGGT CTTTATGTCG GAGCGGATGT AAGGCGAGCG GACTATCGCA AGTTACTGCA TCAATTTGGG CGTTTAGGTG CTTCTTTGTG GAAAAAAAGT CACGGCATTG ATGAACGTGA AGTGGTGACT GAGCGCGAAC GAAAATCTGT CGGTGTGGAG TACACCTTTA GCCAAAACAT TTCGACGTTT CAGGAGTGTT GGCAAGTGAT TGAACAGAAA TTGTATCCGG AGCTAGATGC TCGTTTGAGT CGGGCTCACC CACAGCGAGG CATTATTAAA CAAGGCATTA AAGTGAAATT TGCTGATTTC CAACAGACAA CCATTGAGCA TGTTCACCCT GCATTAGAGC TCGACTACTT CCACGAGCTG TTAGAGCAAG TGTTAACTCG CCAGCAAGGA CGAGAAATTC GCTTACTTGG TTTAAGTGTC ATGCTTAAGC CGGAATTGCA GATGAAACAG CTATCGATGT TTCCGAGTGA TGGATGGCAA TAG
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Protein sequence | MQDRIRKIIH VDMDCFFAAV EMRDNPAYRE IALAVGGHEK QRGVISTCNY QARKFGVRSA MPTAQALKLC PQLHVVPGRM SVYKSVSQQI QTIFQRYTSL IEPLSLDEAY LDVSESTAYQ GSATLIAQAI RRDIWQELNL TASAGVAPIK FLAKVASDLN KPNGLYVVTP DKVQEMVDSL PLEKIPGVGK VALEKLHQAG LYVGADVRRA DYRKLLHQFG RLGASLWKKS HGIDEREVVT ERERKSVGVE YTFSQNISTF QECWQVIEQK LYPELDARLS RAHPQRGIIK QGIKVKFADF QQTTIEHVHP ALELDYFHEL LEQVLTRQQG REIRLLGLSV MLKPELQMKQ LSMFPSDGWQ
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